Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SNORA25.17-201ENST00000517184 124 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC044836.1-201ENST00000519514 274 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 SNRPCP14-201ENST00000524498 205 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 NUPL2-212ENST00000548367 249 ntTSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC055716.1-201ENST00000550077 495 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 AL121928.1-201ENST00000608017 521 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 U4.1-201ENST00000620349 87 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 AC009093.6-201ENST00000622268 553 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.53□□□□□ -1.2
USB1Q9BQ65 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC7.53□□□□□ -1.2
USB1Q9BQ65 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
USB1Q9BQ65 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.52□□□□□ -1.2
USB1Q9BQ65 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
USB1Q9BQ65 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
USB1Q9BQ65 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
USB1Q9BQ65 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
USB1Q9BQ65 AC012513.3-201ENST00000623250 2116 ntBASIC7.52□□□□□ -1.2
USB1Q9BQ65 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.52□□□□□ -1.2
USB1Q9BQ65 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 RN7SKP173-201ENST00000362821 315 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 Y_RNA.188-201ENST00000363952 111 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 Y_RNA.197-201ENST00000364004 102 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 RNU6-289P-201ENST00000364093 107 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 RN7SKP37-201ENST00000364494 296 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 OR52E6-202ENST00000379946 954 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC084880.1-201ENST00000392530 545 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 AL136116.1-201ENST00000403591 381 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 RNU6-847P-201ENST00000411115 108 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 ATP5HP4-201ENST00000414313 475 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 PHBP7-201ENST00000415677 814 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 AL451054.2-201ENST00000420896 202 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 PMCHL1-202ENST00000423102 261 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 CFL1P8-201ENST00000436148 475 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
USB1Q9BQ65 AL592114.2-201ENST00000440142 532 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC092809.1-201ENST00000441469 474 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC092601.1-201ENST00000444526 383 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 RPS27AP15-201ENST00000447672 466 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 DAZAP2P1-201ENST00000475212 503 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC027338.2-201ENST00000504382 526 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 AF186996.2-201ENST00000508347 907 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 AC104136.1-201ENST00000512969 394 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 RNU6-988P-201ENST00000519081 107 ntBASIC7.52□□□□□ -1.21
USB1Q9BQ65 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.52□□□□□ -1.21
USB1Q9BQ65 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms