Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 HMGN2P25-201ENST00000486956 268 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 MTCO2P24-201ENST00000515611 426 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 RN7SKP31-201ENST00000516354 278 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 AC022878.1-201ENST00000530684 149 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 AC005363.1-201ENST00000530779 351 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 MIR4800-201ENST00000537353 80 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 KPNA2P3-201ENST00000584190 848 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 RFPL4AP6-201ENST00000616792 846 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 MIR1910-201ENST00000636955 80 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 OR7E11P-202ENST00000642027 1491 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 AF131215.2-201ENST00000531549 1710 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 FARSBP1-201ENST00000435808 1778 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC108467.2-201ENST00000617640 1597 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AL451142.1-201ENST00000375867 775 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 Y_RNA.387-201ENST00000383918 102 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 RNU6-1222P-201ENST00000384615 107 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 PEX12P1-201ENST00000400284 1048 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 AL356967.1-201ENST00000406305 431 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 VN1R8P-201ENST00000407739 893 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 BTF3P9-201ENST00000418784 283 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 RAB9AP5-201ENST00000437794 597 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 RAB9AP2-201ENST00000443911 597 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 RPL23AP20-201ENST00000447965 421 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AL139156.3-201ENST00000454802 394 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AL122013.1-201ENST00000473054 801 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 RN7SL861P-201ENST00000473793 285 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 RN7SL170P-201ENST00000487098 295 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 NDUFA3P2-201ENST00000531434 232 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 MIR4307-201ENST00000582802 84 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC011500.1-201ENST00000601963 469 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 RN7SL778P-201ENST00000607160 297 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC006335.3-201ENST00000613408 292 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC010332.1-201ENST00000620439 97 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC009268.2-201ENST00000621925 457 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC100810.6-201ENST00000638068 285 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms