Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
TOPBP1Q92547 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC8.97□□□□□ -0.97
TOPBP1Q92547 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TOPBP1Q92547 AC016717.3-201ENST00000624730 554 ntBASIC8.97□□□□□ -0.97
TOPBP1Q92547 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.97□□□□□ -0.97
TOPBP1Q92547 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
TOPBP1Q92547 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC8.97□□□□□ -0.97
TOPBP1Q92547 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TOPBP1Q92547 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC8.97□□□□□ -0.97
TOPBP1Q92547 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
TOPBP1Q92547 PABPC1P8-201ENST00000452851 2086 ntBASIC8.96□□□□□ -0.97
TOPBP1Q92547 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
TOPBP1Q92547 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC8.96□□□□□ -0.97
TOPBP1Q92547 RPS16P5-201ENST00000406501 404 ntBASIC8.96□□□□□ -0.97
TOPBP1Q92547 MIR1182-201ENST00000408363 97 ntBASIC8.96□□□□□ -0.97
TOPBP1Q92547 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC8.96□□□□□ -0.97
TOPBP1Q92547 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC8.96□□□□□ -0.97
TOPBP1Q92547 AC021106.1-201ENST00000509020 1058 ntBASIC8.96□□□□□ -0.97
TOPBP1Q92547 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8.96□□□□□ -0.97
TOPBP1Q92547 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC8.96□□□□□ -0.97
TOPBP1Q92547 MIR4301-201ENST00000577203 66 ntBASIC8.96□□□□□ -0.97
TOPBP1Q92547 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC8.96□□□□□ -0.97
TOPBP1Q92547 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.96□□□□□ -0.97
TOPBP1Q92547 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC8.96□□□□□ -0.97
TOPBP1Q92547 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TOPBP1Q92547 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC8.96□□□□□ -0.98
TOPBP1Q92547 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TOPBP1Q92547 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TOPBP1Q92547 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TOPBP1Q92547 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TOPBP1Q92547 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.96□□□□□ -0.98
TOPBP1Q92547 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TOPBP1Q92547 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TOPBP1Q92547 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TOPBP1Q92547 RPL32P3-201ENST00000359025 275 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 RNU1-136P-201ENST00000384181 164 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
TOPBP1Q92547 GLULP6-201ENST00000399502 913 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 DNAJC19P7-201ENST00000428811 344 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 FABP5P2-201ENST00000439042 408 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 AC063943.1-201ENST00000465434 453 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 AC092754.1-201ENST00000472975 479 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 AL161747.1-201ENST00000480068 358 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 AC134698.5-201ENST00000519444 336 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 SDAD1P1-202ENST00000524156 2051 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC8.95□□□□□ -0.98
TOPBP1Q92547 BGLT3-201ENST00000564523 994 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 PDCD6IPP2-207ENST00000566321 1069 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 AL359195.2-201ENST00000623657 4412 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.95□□□□□ -0.98
TOPBP1Q92547 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TOPBP1Q92547 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
TOPBP1Q92547 HSPD1P12-201ENST00000429127 1069 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 AL365220.1-201ENST00000432923 399 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 AC093414.1-201ENST00000434712 514 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 RPL7P11-201ENST00000437586 658 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 RPS23P7-201ENST00000466210 444 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 AC091153.1-201ENST00000466297 402 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TOPBP1Q92547 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC8.95□□□□□ -0.98
TOPBP1Q92547 AC140172.1-201ENST00000502928 141 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC8.95□□□□□ -0.98
TOPBP1Q92547 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TOPBP1Q92547 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.95□□□□□ -0.98
TOPBP1Q92547 AP005432.2-201ENST00000608162 586 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
TOPBP1Q92547 AC068870.1-201ENST00000563737 2455 ntBASIC8.95□□□□□ -0.98
TOPBP1Q92547 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC8.95□□□□□ -0.98
TOPBP1Q92547 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TOPBP1Q92547 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC8.94□□□□□ -0.98
TOPBP1Q92547 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TOPBP1Q92547 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TOPBP1Q92547 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TOPBP1Q92547 AL031651.1-201ENST00000615357 1438 ntBASIC8.94□□□□□ -0.98
TOPBP1Q92547 RNA5SP332-201ENST00000391063 115 ntBASIC8.94□□□□□ -0.98
TOPBP1Q92547 RNGTTP1-201ENST00000420965 728 ntBASIC8.94□□□□□ -0.98
TOPBP1Q92547 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.94□□□□□ -0.98
TOPBP1Q92547 AC103987.1-201ENST00000473394 348 ntBASIC8.94□□□□□ -0.98
TOPBP1Q92547 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC8.94□□□□□ -0.98
TOPBP1Q92547 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC8.94□□□□□ -0.98
TOPBP1Q92547 IGKV1-32-201ENST00000519290 311 ntBASIC8.94□□□□□ -0.98
TOPBP1Q92547 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC8.94□□□□□ -0.98
TOPBP1Q92547 AC008147.3-201ENST00000548666 354 ntBASIC8.94□□□□□ -0.98
TOPBP1Q92547 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
TOPBP1Q92547 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TOPBP1Q92547 MIR3667-201ENST00000581025 74 ntBASIC8.94□□□□□ -0.98
TOPBP1Q92547 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC8.94□□□□□ -0.98
TOPBP1Q92547 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
TOPBP1Q92547 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
TOPBP1Q92547 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
TOPBP1Q92547 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC8.93□□□□□ -0.98
TOPBP1Q92547 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TOPBP1Q92547 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TOPBP1Q92547 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TOPBP1Q92547 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
TOPBP1Q92547 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.93□□□□□ -0.98
TOPBP1Q92547 RN7SKP100-201ENST00000411258 284 ntBASIC8.93□□□□□ -0.98
TOPBP1Q92547 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC8.93□□□□□ -0.98
TOPBP1Q92547 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.93□□□□□ -0.98
TOPBP1Q92547 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms