Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6□□□□□ -1.45
HMGB4Q8WW32 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6□□□□□ -1.45
HMGB4Q8WW32 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGB4Q8WW32 RN7SKP160-201ENST00000363804 340 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGB4Q8WW32 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6□□□□□ -1.45
HMGB4Q8WW32 AL355143.1-201ENST00000407101 841 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGB4Q8WW32 AK4P4-201ENST00000419465 646 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6□□□□□ -1.45
HMGB4Q8WW32 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6□□□□□ -1.45
HMGB4Q8WW32 AC127526.2-201ENST00000426436 775 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6□□□□□ -1.45
HMGB4Q8WW32 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6□□□□□ -1.45
HMGB4Q8WW32 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6□□□□□ -1.45
HMGB4Q8WW32 MTND2P6-201ENST00000455337 1030 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 AC108751.3-201ENST00000461814 1020 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6□□□□□ -1.45
HMGB4Q8WW32 RN7SL466P-201ENST00000497546 295 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6□□□□□ -1.45
HMGB4Q8WW32 NENFP3-201ENST00000503735 313 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGB4Q8WW32 IGLV2-28-201ENST00000520681 304 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 OR5D2P-201ENST00000524390 911 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6□□□□□ -1.45
HMGB4Q8WW32 AC093510.2-201ENST00000562820 896 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 MIR4505-201ENST00000582238 73 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6□□□□□ -1.45
HMGB4Q8WW32 AC020916.2-201ENST00000591242 360 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 ABI1P1-201ENST00000603375 1120 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 FO393422.1-201ENST00000603908 708 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 BNIP3P31-201ENST00000604515 566 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 AL683813.2-201ENST00000605245 502 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 AL096803.3-201ENST00000609032 532 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 AL645927.2-201ENST00000618350 349 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 AC010872.1-201ENST00000624225 675 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 AC003992.1-201ENST00000635364 557 ntBASIC6□□□□□ -1.45
HMGB4Q8WW32 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6□□□□□ -1.45
HMGB4Q8WW32 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGB4Q8WW32 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HMGB4Q8WW32 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
HMGB4Q8WW32 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6□□□□□ -1.45
HMGB4Q8WW32 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HMGB4Q8WW32 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HMGB4Q8WW32 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 RNA5SP46-201ENST00000362370 120 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 SNORA63.3-201ENST00000362682 132 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 RNA5SP394-201ENST00000364216 119 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 GCNT6-201ENST00000379591 934 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 UBE2D3P3-201ENST00000426992 425 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AL138787.1-202ENST00000437804 898 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 EEF1B2P6-201ENST00000445713 673 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AC104164.1-201ENST00000460282 590 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AC026348.1-201ENST00000462549 1053 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 HMGN2P36-201ENST00000529541 409 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AC005242.1-201ENST00000585658 438 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AP004372.1-201ENST00000604842 844 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 AC096921.2-201ENST00000561507 1916 ntBASIC5.99□□□□□ -1.45
HMGB4Q8WW32 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.99□□□□□ -1.45
HMGB4Q8WW32 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 475 ms