Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNE4Q8N205 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SYNE4Q8N205 AC104162.1-201ENST00000430831 2382 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNE4Q8N205 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNE4Q8N205 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 RN7SKP28-201ENST00000364770 305 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNE4Q8N205 AL133270.1-201ENST00000402635 279 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 RN7SKP279-201ENST00000411383 298 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 MTCO2P17-201ENST00000424336 677 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SYNE4Q8N205 MTCO3P43-201ENST00000440974 771 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SYNE4Q8N205 AC119751.4-201ENST00000507498 357 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 AC147055.3-201ENST00000510547 851 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 OR51A1P-201ENST00000511110 946 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 RN7SL708P-201ENST00000580952 299 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 AP002884.5-201ENST00000595053 1132 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 AC245884.10-201ENST00000597355 337 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 AC015849.6-201ENST00000605454 474 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 BNIP3P7-201ENST00000605641 516 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 AP000770.2-201ENST00000623694 100 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SYNE4Q8N205 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 AC005224.3-201ENST00000584683 2140 ntBASIC7.1□□□□□ -1.27
SYNE4Q8N205 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNE4Q8N205 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SYNE4Q8N205 SNORA16A-201ENST00000384342 137 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 AL360271.1-201ENST00000395679 510 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 FABP12P1-201ENST00000401911 322 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 RSL24D1P1-201ENST00000404972 493 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 MTND2P2-201ENST00000434633 945 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 MTND4P15-201ENST00000437913 1033 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 AURKAPS1-201ENST00000451805 1212 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 CBX1P2-201ENST00000453841 458 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC108161.1-201ENST00000461060 402 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC108729.1-201ENST00000487812 947 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 RPL15P21-201ENST00000495592 567 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC105384.2-201ENST00000508433 640 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC021146.10-201ENST00000515628 706 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC025857.1-201ENST00000525252 377 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 OR4R2P-201ENST00000530815 597 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC012557.1-201ENST00000607115 611 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 AC104763.3-201ENST00000613765 618 ntBASIC7.09□□□□□ -1.27
SYNE4Q8N205 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SYNE4Q8N205 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SYNE4Q8N205 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
SYNE4Q8N205 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SYNE4Q8N205 AL033543.1-201ENST00000623440 13454 ntBASIC7.09□□□□□ -1.28
SYNE4Q8N205 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SYNE4Q8N205 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNE4Q8N205 MTCO1P15-201ENST00000529569 1526 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms