Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 OR7E156P-201ENST00000400303 464 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 RN7SKP240-201ENST00000410583 375 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AL445213.1-201ENST00000412589 747 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 MRPS21P2-201ENST00000424704 264 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC113412.1-201ENST00000425840 504 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC108751.3-201ENST00000461814 1020 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC021106.1-201ENST00000509020 1058 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC006499.4-201ENST00000510947 694 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC079600.1-201ENST00000550326 297 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AL138895.2-201ENST00000603019 178 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AL162574.1-201ENST00000615702 950 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC106872.5-201ENST00000508856 1416 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 NLRP3P1-201ENST00000622303 1785 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 OR4G1P-202ENST00000641173 1788 ntBASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CDKL3Q8IVW4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 RNA5SP131-201ENST00000365452 119 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 VN1R12P-201ENST00000403778 876 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 AC007161.1-204ENST00000423039 460 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 CDY8P-201ENST00000428380 1279 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 CDY20P-201ENST00000447528 1279 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 RPSAP51-201ENST00000497462 645 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 AC091912.1-201ENST00000511351 248 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 RNU6-1334P-201ENST00000516032 105 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 SEPT10P1-201ENST00000517342 1162 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 uc_338.7-201ENST00000621834 124 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 AL138820.1-201ENST00000617901 5305 ntBASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDKL3Q8IVW4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 AC026523.2-201ENST00000625039 7739 ntBASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 SRRM1P3-201ENST00000426911 2678 ntBASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 RNA5SP394-201ENST00000364216 119 ntBASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 MIR621-201ENST00000384919 96 ntBASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDKL3Q8IVW4 GPS2P1-201ENST00000411761 986 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms