Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AC209154.1-201ENST00000582156 337 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AC087283.1-201ENST00000604029 1074 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AC008745.1-201ENST00000604064 271 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 AC099494.2-201ENST00000623371 978 ntBASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDC42BPAQ5VT25 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CDC42BPAQ5VT25 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CDC42BPAQ5VT25 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 AL449283.1-201ENST00000602631 3403 ntBASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 OR9K1P-202ENST00000641111 3217 ntBASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 AL078599.1-201ENST00000402075 293 ntBASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 AL590139.1-201ENST00000416267 400 ntBASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 AC060780.2-201ENST00000589047 198 ntBASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDC42BPAQ5VT25 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 RPS4XP16-201ENST00000427198 791 ntBASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 AC006466.1-201ENST00000438721 289 ntBASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 snoU13.20-201ENST00000459180 104 ntBASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 AP000797.2-201ENST00000475768 606 ntBASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 GAPDHP62-201ENST00000515313 990 ntBASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 SCARNA20.4-201ENST00000516969 131 ntBASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 BNIP3P1-201ENST00000547295 580 ntBASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 AC008814.1-201ENST00000603797 406 ntBASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 AC100757.1-201ENST00000616872 1835 ntBASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42BPAQ5VT25 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 RPL7P56-201ENST00000429441 717 ntBASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 ELOCP3-201ENST00000439303 348 ntBASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 NDUFA5P8-201ENST00000449019 346 ntBASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 OR51K1P-201ENST00000510214 950 ntBASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 AC068790.7-201ENST00000602347 528 ntBASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 AC244107.2-201ENST00000611773 76 ntBASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 MIR7641-1-201ENST00000627518 61 ntBASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 NEK3-211ENST00000629912 141 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 AL596275.2-208ENST00000641192 594 ntBASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 OR51A1P-201ENST00000511110 946 ntBASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 AC091912.1-201ENST00000511351 248 ntBASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 OR7H2P-201ENST00000513483 306 ntBASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 AC079075.1-201ENST00000559543 878 ntBASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CDC42BPAQ5VT25 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms