Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 MIR191-201ENST00000384873 92 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 MT-TP-201ENST00000387461 68 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 GAPDHP15-201ENST00000398586 975 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 SNORA77.2-201ENST00000408571 112 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 AL158827.1-201ENST00000416300 391 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 RPA2P2-201ENST00000419698 796 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 ARL2BPP3-201ENST00000421226 480 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 VN1R20P-201ENST00000425215 966 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC073410.1-201ENST00000435125 589 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 CALM1P2-201ENST00000452941 448 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 H3F3AP5-201ENST00000475267 429 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC124945.1-201ENST00000485133 188 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 RPL34P33-201ENST00000486062 334 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 TRBV5-2-201ENST00000489095 273 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 HMGN1P16-201ENST00000508308 283 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 ST13P12-201ENST00000508958 1094 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 BTG4P1-201ENST00000510421 183 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 OR4A46P-201ENST00000527255 933 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC093014.1-201ENST00000548926 724 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC084373.1-201ENST00000603311 235 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC006363.1-201ENST00000603806 463 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC008555.7-201ENST00000605008 583 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 BNIP3P19-201ENST00000605397 577 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC012676.3-201ENST00000614983 479 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC245389.2-201ENST00000616023 576 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC242843.1-201ENST00000618702 573 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC015660.5-201ENST00000623238 564 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC38Q502W7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC38Q502W7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC38Q502W7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC38Q502W7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC38Q502W7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC38Q502W7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC38Q502W7 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC38Q502W7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC38Q502W7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 Z82198.3-201ENST00000421145 199 ntBASIC6.2□□□□□ -1.42
CCDC38Q502W7 RPL7AP51-201ENST00000422016 760 ntBASIC6.2□□□□□ -1.42
CCDC38Q502W7 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC38Q502W7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.2□□□□□ -1.42
CCDC38Q502W7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 AC079080.1-201ENST00000479841 822 ntBASIC6.2□□□□□ -1.42
CCDC38Q502W7 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC38Q502W7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 GUSBP9-201ENST00000510138 584 ntBASIC6.2□□□□□ -1.42
CCDC38Q502W7 TOMM22P4-201ENST00000511318 336 ntBASIC6.2□□□□□ -1.42
CCDC38Q502W7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 AC116917.1-201ENST00000520558 305 ntBASIC6.2□□□□□ -1.42
CCDC38Q502W7 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC38Q502W7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 OSBPL9P3-201ENST00000534523 595 ntBASIC6.2□□□□□ -1.42
CCDC38Q502W7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC38Q502W7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC38Q502W7 AC021483.2-201ENST00000567415 758 ntBASIC6.2□□□□□ -1.42
CCDC38Q502W7 AC138207.8-204ENST00000579588 527 ntBASIC6.2□□□□□ -1.42
CCDC38Q502W7 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms