Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC27Q2M243 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC27Q2M243 CIR1P2-201ENST00000514821 1342 ntBASIC8.22□□□□□ -1.09
CCDC27Q2M243 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CCDC27Q2M243 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC27Q2M243 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.22□□□□□ -1.09
CCDC27Q2M243 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC27Q2M243 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CCDC27Q2M243 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC8.21□□□□□ -1.09
CCDC27Q2M243 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CCDC27Q2M243 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC8.21□□□□□ -1.09
CCDC27Q2M243 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
CCDC27Q2M243 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CCDC27Q2M243 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
CCDC27Q2M243 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.21□□□□□ -1.09
CCDC27Q2M243 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.09
CCDC27Q2M243 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC27Q2M243 UBE2Q2P1-202ENST00000354771 883 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 RNU1-49P-201ENST00000363468 159 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 PPCS-201ENST00000372556 984 ntTSL 2 BASIC8.21□□□□□ -1.1
CCDC27Q2M243 MIR433-201ENST00000384837 93 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 MIR513B-201ENST00000385136 84 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 DNAJC19P6-201ENST00000401853 280 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 AL021331.1-201ENST00000402817 582 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 TMA16P2-201ENST00000413187 601 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC007568.1-201ENST00000422912 471 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 VN1R20P-201ENST00000425215 966 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 AL590004.3-202ENST00000445883 451 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 RANP2-201ENST00000456833 229 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 OR7E22P-201ENST00000478335 1035 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC023050.1-201ENST00000498198 304 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC008837.1-201ENST00000511513 412 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 HMGB1P1-201ENST00000522557 636 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC8.21□□□□□ -1.1
CCDC27Q2M243 OR8I1P-201ENST00000529291 931 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC8.21□□□□□ -1.1
CCDC27Q2M243 AL109741.3-201ENST00000561748 592 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 CSNK1A1P1-202ENST00000563423 981 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 NDUFA5P11-201ENST00000567995 343 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC138207.8-204ENST00000579588 527 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC008536.1-201ENST00000602872 669 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 AL021368.3-201ENST00000607119 578 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC27Q2M243 OR8G7P-201ENST00000616658 848 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC073569.3-201ENST00000619055 682 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CCDC27Q2M243 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC27Q2M243 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
CCDC27Q2M243 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC27Q2M243 ZNF733P-202ENST00000444809 1573 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC27Q2M243 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC27Q2M243 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC27Q2M243 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC27Q2M243 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC27Q2M243 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.21□□□□□ -1.1
CCDC27Q2M243 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC27Q2M243 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC27Q2M243 AL133268.1-201ENST00000405676 1401 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC27Q2M243 AC006511.3-201ENST00000624929 1783 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC27Q2M243 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC27Q2M243 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC27Q2M243 Y_RNA.578-201ENST00000390903 88 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 AC092638.1-201ENST00000411966 1275 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 MTCO3P4-201ENST00000419236 787 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 OR2X1P-201ENST00000421144 687 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 AC016908.1-201ENST00000442571 1219 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 MRPL35P2-201ENST00000448009 511 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 NAP1L1P3-201ENST00000462291 880 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 AC021205.1-201ENST00000468797 348 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 RPL29P23-201ENST00000486188 442 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 ZNF519P4-201ENST00000514008 125 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 RNA5SP434-201ENST00000516647 121 ntBASIC8.2□□□□□ -1.1
CCDC27Q2M243 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.2□□□□□ -1.1
CCDC27Q2M243 AC009097.3-201ENST00000563557 1018 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms