Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL359955.1-201ENST00000455242 3275 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CX3CL1P78423 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 GTF2IP4-201ENST00000453092 2054 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.84□□□□□ -1.63
CX3CL1P78423 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CX3CL1P78423 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.84□□□□□ -1.63
CX3CL1P78423 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CX3CL1P78423 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.84□□□□□ -1.63
CX3CL1P78423 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.84□□□□□ -1.63
CX3CL1P78423 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.84□□□□□ -1.63
CX3CL1P78423 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.84□□□□□ -1.63
CX3CL1P78423 AL136520.1-201ENST00000600311 1322 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CX3CL1P78423 RNU1-134P-201ENST00000362935 165 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 SNORD1C-201ENST00000363315 78 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 RNA5SP232-201ENST00000364144 119 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 RNU105B-201ENST00000364478 208 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.84□□□□□ -1.63
CX3CL1P78423 MT-TP-201ENST00000387461 68 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 ATP5F1P6-201ENST00000402768 767 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 RPS15AP30-201ENST00000420976 390 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 AC015983.1-201ENST00000441577 373 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 AC002553.3-201ENST00000453002 341 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 NPM1P17-201ENST00000479221 602 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.84□□□□□ -1.63
CX3CL1P78423 AC079080.1-201ENST00000479841 822 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 AL117692.1-201ENST00000494283 713 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.84□□□□□ -1.63
CX3CL1P78423 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.84□□□□□ -1.63
CX3CL1P78423 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.84□□□□□ -1.63
CX3CL1P78423 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.84□□□□□ -1.63
CX3CL1P78423 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.84□□□□□ -1.63
CX3CL1P78423 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.84□□□□□ -1.63
CX3CL1P78423 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.84□□□□□ -1.63
CX3CL1P78423 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.84□□□□□ -1.63
CX3CL1P78423 HMGN2P47-201ENST00000559378 272 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 AC023158.1-201ENST00000561632 1025 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 AC002519.2-203ENST00000567043 837 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.84□□□□□ -1.63
CX3CL1P78423 MIR4701-201ENST00000583094 63 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.84□□□□□ -1.63
CX3CL1P78423 AC068020.1-201ENST00000594215 661 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 AC130352.1-201ENST00000602979 661 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 AC095038.2-201ENST00000621464 1070 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 FRG1DP-201ENST00000635586 771 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 AC111152.1-202ENST00000635848 339 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
CX3CL1P78423 CASC19-274ENST00000642018 970 ntBASIC4.84□□□□□ -1.63
CX3CL1P78423 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CX3CL1P78423 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CX3CL1P78423 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CX3CL1P78423 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CX3CL1P78423 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.84□□□□□ -1.64
CX3CL1P78423 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CX3CL1P78423 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CX3CL1P78423 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CX3CL1P78423 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CX3CL1P78423 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.83□□□□□ -1.64
CX3CL1P78423 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CX3CL1P78423 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
CX3CL1P78423 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CX3CL1P78423 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.83□□□□□ -1.64
CX3CL1P78423 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CX3CL1P78423 RAD1P1-201ENST00000231383 813 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 RNA5SP453-201ENST00000362503 119 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 SNORA63.3-201ENST00000362682 132 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CX3CL1P78423 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CX3CL1P78423 AL132875.1-201ENST00000403623 949 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 GCNT1P4-201ENST00000404096 329 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AL096829.1-201ENST00000413677 457 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.83□□□□□ -1.64
CX3CL1P78423 AL354766.1-201ENST00000423396 542 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 RPL12P12-201ENST00000424633 501 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.83□□□□□ -1.64
CX3CL1P78423 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 NDUFA5P10-201ENST00000432147 357 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.83□□□□□ -1.64
CX3CL1P78423 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.83□□□□□ -1.64
CX3CL1P78423 ARAFP2-201ENST00000440565 559 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AL512593.1-201ENST00000444758 779 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AL161722.1-201ENST00000446972 1032 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 AC093166.3-201ENST00000448785 303 ntBASIC4.83□□□□□ -1.64
CX3CL1P78423 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms