Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC012075.1-201ENST00000436549 580 ntBASIC6.2□□□□□ -1.42
VCPP55072 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VCPP55072 SNRPCP3-201ENST00000474888 476 ntBASIC6.2□□□□□ -1.42
VCPP55072 CR383656.1-201ENST00000484916 377 ntBASIC6.2□□□□□ -1.42
VCPP55072 AC012123.2-201ENST00000485809 248 ntBASIC6.2□□□□□ -1.42
VCPP55072 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.2□□□□□ -1.42
VCPP55072 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.2□□□□□ -1.42
VCPP55072 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.2□□□□□ -1.42
VCPP55072 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VCPP55072 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.2□□□□□ -1.42
VCPP55072 AC006530.1-201ENST00000555980 571 ntBASIC6.2□□□□□ -1.42
VCPP55072 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.2□□□□□ -1.42
VCPP55072 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.2□□□□□ -1.42
VCPP55072 AL136131.3-201ENST00000607600 188 ntBASIC6.2□□□□□ -1.42
VCPP55072 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.2□□□□□ -1.42
VCPP55072 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
VCPP55072 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCPP55072 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.2□□□□□ -1.42
VCPP55072 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VCPP55072 AC012254.3-201ENST00000591183 2117 ntBASIC6.2□□□□□ -1.42
VCPP55072 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VCPP55072 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
VCPP55072 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VCPP55072 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VCPP55072 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.19□□□□□ -1.42
VCPP55072 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
VCPP55072 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VCPP55072 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.19□□□□□ -1.42
VCPP55072 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VCPP55072 AP002512.4-202ENST00000641599 4530 ntBASIC6.19□□□□□ -1.42
VCPP55072 AC232271.1-201ENST00000602455 2715 ntBASIC6.19□□□□□ -1.42
VCPP55072 RN7SKP128-201ENST00000364270 303 ntBASIC6.19□□□□□ -1.42
VCPP55072 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.19□□□□□ -1.42
VCPP55072 RPL35AP24-201ENST00000413846 330 ntBASIC6.19□□□□□ -1.42
VCPP55072 RBMY2KP-201ENST00000418221 992 ntBASIC6.19□□□□□ -1.42
VCPP55072 OR5W1P-201ENST00000423705 938 ntBASIC6.19□□□□□ -1.42
VCPP55072 AL139148.1-201ENST00000427122 680 ntBASIC6.19□□□□□ -1.42
VCPP55072 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.19□□□□□ -1.42
VCPP55072 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VCPP55072 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.19□□□□□ -1.42
VCPP55072 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.19□□□□□ -1.42
VCPP55072 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.19□□□□□ -1.42
VCPP55072 AL772161.1-201ENST00000439130 476 ntBASIC6.19□□□□□ -1.42
VCPP55072 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.19□□□□□ -1.42
VCPP55072 OSTCP1-201ENST00000455507 450 ntBASIC6.19□□□□□ -1.42
VCPP55072 AC083795.1-201ENST00000491760 320 ntBASIC6.19□□□□□ -1.42
VCPP55072 AC090058.1-201ENST00000498788 435 ntBASIC6.19□□□□□ -1.42
VCPP55072 AC008629.2-201ENST00000503783 483 ntBASIC6.19□□□□□ -1.42
VCPP55072 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.19□□□□□ -1.42
VCPP55072 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VCPP55072 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.19□□□□□ -1.42
VCPP55072 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.19□□□□□ -1.42
VCPP55072 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.19□□□□□ -1.42
VCPP55072 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.19□□□□□ -1.42
VCPP55072 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
VCPP55072 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.19□□□□□ -1.42
VCPP55072 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.19□□□□□ -1.42
VCPP55072 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.19□□□□□ -1.42
VCPP55072 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VCPP55072 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.19□□□□□ -1.42
VCPP55072 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.19□□□□□ -1.42
VCPP55072 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
VCPP55072 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VCPP55072 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
VCPP55072 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
VCPP55072 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VCPP55072 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VCPP55072 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
VCPP55072 NLRP3P1-201ENST00000622303 1785 ntBASIC6.18□□□□□ -1.42
VCPP55072 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.18□□□□□ -1.42
VCPP55072 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
VCPP55072 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VCPP55072 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
VCPP55072 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VCPP55072 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VCPP55072 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
VCPP55072 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
VCPP55072 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.18□□□□□ -1.42
VCPP55072 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VCPP55072 RNA5SP211-201ENST00000365516 117 ntBASIC6.18□□□□□ -1.42
VCPP55072 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.18□□□□□ -1.42
VCPP55072 AL596448.1-201ENST00000415024 392 ntBASIC6.18□□□□□ -1.42
VCPP55072 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.18□□□□□ -1.42
VCPP55072 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.18□□□□□ -1.42
VCPP55072 AL606490.8-201ENST00000441624 319 ntBASIC6.18□□□□□ -1.42
VCPP55072 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.18□□□□□ -1.42
VCPP55072 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VCPP55072 OR2AO1P-201ENST00000476497 403 ntBASIC6.18□□□□□ -1.42
VCPP55072 AC090142.2-201ENST00000483263 416 ntBASIC6.18□□□□□ -1.42
VCPP55072 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VCPP55072 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
VCPP55072 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
VCPP55072 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.18□□□□□ -1.42
VCPP55072 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.18□□□□□ -1.42
VCPP55072 AP001357.1-201ENST00000586304 1053 ntBASIC6.18□□□□□ -1.42
VCPP55072 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.18□□□□□ -1.42
VCPP55072 AC006115.2-201ENST00000596823 202 ntBASIC6.18□□□□□ -1.42
VCPP55072 AC104785.1-201ENST00000603220 588 ntBASIC6.18□□□□□ -1.42
VCPP55072 LSM1P2-201ENST00000604911 322 ntBASIC6.18□□□□□ -1.42
VCPP55072 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms