Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.71□□□□□ -1.5
LIMK2P53671 HMGN2P36-201ENST00000529541 409 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
LIMK2P53671 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.71□□□□□ -1.5
LIMK2P53671 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.71□□□□□ -1.5
LIMK2P53671 DHFRP1-201ENST00000579682 559 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 AC007786.3-201ENST00000615154 596 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 MIR6133-201ENST00000617057 108 ntBASIC5.71□□□□□ -1.5
LIMK2P53671 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.71□□□□□ -1.5
LIMK2P53671 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LIMK2P53671 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LIMK2P53671 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LIMK2P53671 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.71□□□□□ -1.5
LIMK2P53671 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.71□□□□□ -1.5
LIMK2P53671 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LIMK2P53671 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LIMK2P53671 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.71□□□□□ -1.5
LIMK2P53671 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.71□□□□□ -1.5
LIMK2P53671 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK2P53671 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK2P53671 AL161912.4-201ENST00000623889 2468 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK2P53671 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK2P53671 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK2P53671 AL050305.1-201ENST00000399993 1230 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 AC096921.1-201ENST00000411661 375 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 AL691447.1-201ENST00000419456 387 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.7□□□□□ -1.5
LIMK2P53671 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.7□□□□□ -1.5
LIMK2P53671 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.7□□□□□ -1.5
LIMK2P53671 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LIMK2P53671 RPS27AP6-201ENST00000427962 448 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.7□□□□□ -1.5
LIMK2P53671 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.7□□□□□ -1.5
LIMK2P53671 LINC02210-201ENST00000444561 288 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.7□□□□□ -1.5
LIMK2P53671 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.7□□□□□ -1.5
LIMK2P53671 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK2P53671 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK2P53671 AC098799.1-201ENST00000504752 800 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.7□□□□□ -1.5
LIMK2P53671 AC139365.2-201ENST00000517972 253 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 AC090022.1-201ENST00000546569 311 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.7□□□□□ -1.5
LIMK2P53671 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.7□□□□□ -1.5
LIMK2P53671 OOSP1P2-201ENST00000579644 351 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK2P53671 RARSP1-201ENST00000542842 1418 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
LIMK2P53671 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK2P53671 AC083899.1-201ENST00000454465 3819 ntBASIC5.7□□□□□ -1.5
LIMK2P53671 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.7□□□□□ -1.5
LIMK2P53671 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
LIMK2P53671 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK2P53671 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
LIMK2P53671 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.69□□□□□ -1.5
LIMK2P53671 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
LIMK2P53671 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
LIMK2P53671 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LIMK2P53671 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LIMK2P53671 AL121886.1-201ENST00000358609 435 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 RNA5SP326-201ENST00000363209 110 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 AC005042.1-201ENST00000393397 800 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.69□□□□□ -1.5
LIMK2P53671 NIFKP3-201ENST00000417799 865 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 RNF10P1-201ENST00000418589 369 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 TMEM183AP1-205ENST00000432739 290 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 MTCO3P17-201ENST00000443775 513 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 AC108751.3-201ENST00000461814 1020 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK2P53671 RN7SL177P-201ENST00000476596 299 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LIMK2P53671 MTCO3P42-201ENST00000509488 518 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.69□□□□□ -1.5
LIMK2P53671 MTCO3P39-201ENST00000514812 518 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.69□□□□□ -1.5
LIMK2P53671 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.69□□□□□ -1.5
LIMK2P53671 AC096996.1-201ENST00000563813 325 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 MIR3176-201ENST00000582210 90 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.69□□□□□ -1.5
LIMK2P53671 AL583832.1-201ENST00000603227 784 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK2P53671 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK2P53671 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.69□□□□□ -1.5
LIMK2P53671 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LIMK2P53671 AC007938.2-201ENST00000604666 2634 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 CR383656.5-201ENST00000547616 1340 ntBASIC5.69□□□□□ -1.5
LIMK2P53671 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LIMK2P53671 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.69□□□□□ -1.5
LIMK2P53671 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LIMK2P53671 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.69□□□□□ -1.5
LIMK2P53671 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.69□□□□□ -1.5
LIMK2P53671 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LIMK2P53671 OR4F13P-202ENST00000560066 2054 ntBASIC5.68□□□□□ -1.5
LIMK2P53671 AC006206.1-201ENST00000544842 3387 ntBASIC5.68□□□□□ -1.5
LIMK2P53671 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LIMK2P53671 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms