Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.95□□□□□ -1.62
CX3CR1P49238 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CX3CR1P49238 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 OR4F13P-202ENST00000560066 2054 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CX3CR1P49238 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CR1P49238 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.94□□□□□ -1.62
CX3CR1P49238 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CX3CR1P49238 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CR1P49238 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CR1P49238 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CR1P49238 AC125336.1-201ENST00000508893 2827 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CR1P49238 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CX3CR1P49238 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CX3CR1P49238 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CR1P49238 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CX3CR1P49238 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CX3CR1P49238 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CR1P49238 SUGT1P2-201ENST00000379452 992 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AC004386.1-201ENST00000393214 761 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 GPS2P1-201ENST00000411761 986 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 RNF10P1-201ENST00000418589 369 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 BX323845.3-201ENST00000428215 527 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 NXT1P1-201ENST00000458481 316 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AC005165.2-201ENST00000466070 380 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 ATP5LP5-201ENST00000483050 299 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AC009120.1-201ENST00000493458 473 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 RPS17P5-201ENST00000498293 408 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.94□□□□□ -1.62
CX3CR1P49238 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.94□□□□□ -1.62
CX3CR1P49238 AC114781.3-201ENST00000512083 142 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CR1P49238 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CR1P49238 RNA5SP230-201ENST00000517039 122 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AC021678.3-201ENST00000517893 476 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CR1P49238 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.94□□□□□ -1.62
CX3CR1P49238 PMS2P3-207ENST00000529061 717 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.94□□□□□ -1.62
CX3CR1P49238 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.94□□□□□ -1.62
CX3CR1P49238 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.94□□□□□ -1.62
CX3CR1P49238 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.94□□□□□ -1.62
CX3CR1P49238 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.94□□□□□ -1.62
CX3CR1P49238 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.94□□□□□ -1.62
CX3CR1P49238 AC234775.3-201ENST00000564612 656 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AC009852.2-201ENST00000567898 485 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.94□□□□□ -1.62
CX3CR1P49238 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.94□□□□□ -1.62
CX3CR1P49238 MIR4660-201ENST00000583549 74 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CX3CR1P49238 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.94□□□□□ -1.62
CX3CR1P49238 AL451049.1-201ENST00000608672 497 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.94□□□□□ -1.62
CX3CR1P49238 AC024884.1-201ENST00000620583 399 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AC129778.1-202ENST00000623812 261 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AL591379.1-207ENST00000635982 261 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 AC138627.1-204ENST00000641894 765 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CR1P49238 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CR1P49238 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CR1P49238 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CX3CR1P49238 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.94□□□□□ -1.62
CX3CR1P49238 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CX3CR1P49238 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CR1P49238 PWAR1-201ENST00000624188 2414 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.94□□□□□ -1.62
CX3CR1P49238 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CX3CR1P49238 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.94□□□□□ -1.62
CX3CR1P49238 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.94□□□□□ -1.62
CX3CR1P49238 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.93□□□□□ -1.62
CX3CR1P49238 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CR1P49238 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.93□□□□□ -1.62
CX3CR1P49238 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CX3CR1P49238 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CR1P49238 AC005261.6-201ENST00000623072 1387 ntBASIC4.93□□□□□ -1.62
CX3CR1P49238 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CR1P49238 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CR1P49238 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CR1P49238 MIPEPP2-201ENST00000422560 1819 ntBASIC4.93□□□□□ -1.62
CX3CR1P49238 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CR1P49238 AC026523.2-201ENST00000625039 7739 ntBASIC4.93□□□□□ -1.62
CX3CR1P49238 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CR1P49238 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CR1P49238 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CX3CR1P49238 AC092681.1-201ENST00000297369 291 ntBASIC4.93□□□□□ -1.62
CX3CR1P49238 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CX3CR1P49238 SNORA70.6-201ENST00000383934 134 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms