Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
HOXA13P31271 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
HOXA13P31271 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXA13P31271 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HOXA13P31271 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXA13P31271 SNORA16A-201ENST00000384342 137 ntBASIC6.36□□□□□ -1.39
HOXA13P31271 RNU1-77P-201ENST00000390868 162 ntBASIC6.36□□□□□ -1.39
HOXA13P31271 AC117434.1-201ENST00000419971 836 ntBASIC6.36□□□□□ -1.39
HOXA13P31271 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXA13P31271 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXA13P31271 NPM1P19-201ENST00000450070 712 ntBASIC6.36□□□□□ -1.39
HOXA13P31271 AC011225.1-201ENST00000457751 369 ntBASIC6.36□□□□□ -1.39
HOXA13P31271 AC115223.1-201ENST00000466377 870 ntBASIC6.36□□□□□ -1.39
HOXA13P31271 MORF4L2P1-201ENST00000503761 858 ntBASIC6.36□□□□□ -1.39
HOXA13P31271 SNORA48.9-201ENST00000516419 162 ntBASIC6.36□□□□□ -1.39
HOXA13P31271 RN7SKP99-201ENST00000517028 307 ntBASIC6.36□□□□□ -1.39
HOXA13P31271 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXA13P31271 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 NANOGP3-201ENST00000605855 286 ntBASIC6.36□□□□□ -1.39
HOXA13P31271 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXA13P31271 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXA13P31271 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXA13P31271 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXA13P31271 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
HOXA13P31271 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXA13P31271 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXA13P31271 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HOXA13P31271 AC087516.1-201ENST00000561236 2428 ntBASIC6.36□□□□□ -1.39
HOXA13P31271 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
HOXA13P31271 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXA13P31271 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HOXA13P31271 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA13P31271 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXA13P31271 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 MTCO1P22-201ENST00000604619 1360 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HOXA13P31271 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HOXA13P31271 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 RN7SKP6-201ENST00000364795 319 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 RNU1-136P-201ENST00000384181 164 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 RNU6-171P-201ENST00000384354 107 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 AC009804.1-201ENST00000400949 179 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 AL009179.1-201ENST00000406085 265 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 RPSAP35-201ENST00000413753 818 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 Z93019.1-201ENST00000416450 973 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA13P31271 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 AL355433.1-201ENST00000422804 300 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 CYCSP12-201ENST00000437729 300 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXA13P31271 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXA13P31271 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXA13P31271 RN7SL583P-201ENST00000475692 287 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
HOXA13P31271 CCNHP1-201ENST00000513311 678 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 RN7SKP253-201ENST00000516424 309 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXA13P31271 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXA13P31271 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXA13P31271 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA13P31271 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA13P31271 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXA13P31271 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXA13P31271 AC138473.1-201ENST00000605717 526 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA13P31271 AC136428.4-201ENST00000634254 1155 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA13P31271 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
HOXA13P31271 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA13P31271 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.35□□□□□ -1.39
HOXA13P31271 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HOXA13P31271 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HOXA13P31271 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
HOXA13P31271 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA13P31271 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA13P31271 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA13P31271 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXA13P31271 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HOXA13P31271 RPL11P3-201ENST00000395256 523 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXA13P31271 RN7SKP278-201ENST00000410504 342 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms