Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL390774.1-201ENST00000411924 246 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 RPL35AP24-201ENST00000413846 330 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 OR52B5P-201ENST00000435337 951 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 RPS26P41-201ENST00000450370 284 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXA9P31269 MEMO1P4-201ENST00000453590 386 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXA9P31269 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
HOXA9P31269 AC093270.2-201ENST00000486157 792 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 DUTP1-201ENST00000493631 470 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 AC072052.1-201ENST00000496556 306 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA9P31269 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXA9P31269 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA9P31269 AL139407.1-201ENST00000613826 1175 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 RPSAP73-201ENST00000614820 330 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA9P31269 AC068870.2-201ENST00000620635 389 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 OR52B5P-202ENST00000641118 1110 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA9P31269 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
HOXA9P31269 AC073429.2-201ENST00000569694 1444 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 AL161912.4-201ENST00000623889 2468 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA9P31269 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA9P31269 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HOXA9P31269 AC012078.1-201ENST00000405035 1646 ntBASIC5.88□□□□□ -1.47
HOXA9P31269 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA9P31269 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HOXA9P31269 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA9P31269 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HOXA9P31269 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXA9P31269 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA9P31269 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXA9P31269 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HOXA9P31269 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA9P31269 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA9P31269 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA9P31269 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HOXA9P31269 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HOXA9P31269 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HOXA9P31269 RNA5SP335-201ENST00000363817 110 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 AC005042.1-201ENST00000393397 800 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 AL133325.1-201ENST00000421090 382 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 AL365220.1-201ENST00000432923 399 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXA9P31269 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA9P31269 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXA9P31269 RN7SL222P-201ENST00000476452 299 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 RN7SL826P-201ENST00000479724 288 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 RPS4XP1-201ENST00000482189 787 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 RPL15P21-201ENST00000495592 567 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 AC008953.1-201ENST00000497334 318 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 TOMM22P4-201ENST00000511318 336 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 AP006245.2-201ENST00000522004 300 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 OR4A46P-201ENST00000527255 933 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 AC022832.1-201ENST00000530718 645 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 AC078878.1-201ENST00000539832 958 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA9P31269 BLZF2P-201ENST00000553776 1130 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXA9P31269 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXA9P31269 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXA9P31269 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA9P31269 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXA9P31269 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.87□□□□□ -1.47
HOXA9P31269 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA9P31269 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXA9P31269 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA9P31269 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA9P31269 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 AC093297.3-201ENST00000607056 2517 ntBASIC5.87□□□□□ -1.47
HOXA9P31269 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA9P31269 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HOXA9P31269 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HOXA9P31269 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
HOXA9P31269 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXA9P31269 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
HOXA9P31269 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXA9P31269 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
HOXA9P31269 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXA9P31269 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXA9P31269 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXA9P31269 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXA9P31269 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms