Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SUMO2P1-206ENST00000445436 284 ntBASIC6.27□□□□□ -1.41
MMP3P08254 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
MMP3P08254 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.27□□□□□ -1.41
MMP3P08254 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 COL6A4P2-205ENST00000509855 506 ntBASIC6.27□□□□□ -1.41
MMP3P08254 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.27□□□□□ -1.41
MMP3P08254 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
MMP3P08254 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.27□□□□□ -1.41
MMP3P08254 HAUS8P1-201ENST00000549005 542 ntBASIC6.27□□□□□ -1.41
MMP3P08254 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.27□□□□□ -1.41
MMP3P08254 AGGF1P7-201ENST00000562369 913 ntBASIC6.27□□□□□ -1.41
MMP3P08254 MIR4311-201ENST00000580794 100 ntBASIC6.27□□□□□ -1.41
MMP3P08254 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.27□□□□□ -1.41
MMP3P08254 AC006115.2-201ENST00000596823 202 ntBASIC6.27□□□□□ -1.41
MMP3P08254 AC005014.3-201ENST00000605985 190 ntBASIC6.27□□□□□ -1.41
MMP3P08254 MIR7155-201ENST00000615925 56 ntBASIC6.27□□□□□ -1.41
MMP3P08254 AC118658.2-201ENST00000618697 459 ntBASIC6.27□□□□□ -1.41
MMP3P08254 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
MMP3P08254 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
MMP3P08254 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
MMP3P08254 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
MMP3P08254 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
MMP3P08254 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
MMP3P08254 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
MMP3P08254 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.26□□□□□ -1.41
MMP3P08254 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MMP3P08254 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
MMP3P08254 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
MMP3P08254 ZNF658B-201ENST00000602828 3408 ntBASIC6.26□□□□□ -1.41
MMP3P08254 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
MMP3P08254 AC005725.1-201ENST00000577346 2607 ntBASIC6.26□□□□□ -1.41
MMP3P08254 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MMP3P08254 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MMP3P08254 AC005042.1-201ENST00000393397 800 ntBASIC6.26□□□□□ -1.41
MMP3P08254 RN7SKP273-201ENST00000411392 314 ntBASIC6.26□□□□□ -1.41
MMP3P08254 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.26□□□□□ -1.41
MMP3P08254 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.26□□□□□ -1.41
MMP3P08254 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.26□□□□□ -1.41
MMP3P08254 VN1R21P-201ENST00000426703 765 ntBASIC6.26□□□□□ -1.41
MMP3P08254 RAD1P2-201ENST00000446414 663 ntBASIC6.26□□□□□ -1.41
MMP3P08254 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.26□□□□□ -1.41
MMP3P08254 AC079841.1-201ENST00000481228 950 ntBASIC6.26□□□□□ -1.41
MMP3P08254 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
MMP3P08254 AC126177.5-201ENST00000549599 178 ntBASIC6.26□□□□□ -1.41
MMP3P08254 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.26□□□□□ -1.41
MMP3P08254 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.26□□□□□ -1.41
MMP3P08254 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.26□□□□□ -1.41
MMP3P08254 MIR4700-201ENST00000578311 74 ntBASIC6.26□□□□□ -1.41
MMP3P08254 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.26□□□□□ -1.41
MMP3P08254 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.26□□□□□ -1.41
MMP3P08254 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.26□□□□□ -1.41
MMP3P08254 AC092574.1-201ENST00000609771 420 ntBASIC6.26□□□□□ -1.41
MMP3P08254 AC037198.3-201ENST00000616754 526 ntBASIC6.26□□□□□ -1.41
MMP3P08254 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.26□□□□□ -1.41
MMP3P08254 AL139254.3-201ENST00000641097 674 ntBASIC6.26□□□□□ -1.41
MMP3P08254 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
MMP3P08254 MRRFP1-201ENST00000435941 1675 ntBASIC6.26□□□□□ -1.41
MMP3P08254 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
MMP3P08254 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MMP3P08254 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MMP3P08254 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MMP3P08254 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
MMP3P08254 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
MMP3P08254 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
MMP3P08254 AC137056.2-201ENST00000624055 1958 ntBASIC6.26□□□□□ -1.41
MMP3P08254 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MMP3P08254 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
MMP3P08254 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
MMP3P08254 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.25□□□□□ -1.41
MMP3P08254 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.25□□□□□ -1.41
MMP3P08254 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
MMP3P08254 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
MMP3P08254 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
MMP3P08254 SNORD1C-201ENST00000363315 78 ntBASIC6.25□□□□□ -1.41
MMP3P08254 RNA5SP335-201ENST00000363817 110 ntBASIC6.25□□□□□ -1.41
MMP3P08254 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
MMP3P08254 RNA5SP91-201ENST00000390902 119 ntBASIC6.25□□□□□ -1.41
MMP3P08254 SNORA40.4-201ENST00000390971 128 ntBASIC6.25□□□□□ -1.41
MMP3P08254 AL390774.1-201ENST00000411924 246 ntBASIC6.25□□□□□ -1.41
MMP3P08254 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.25□□□□□ -1.41
MMP3P08254 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.25□□□□□ -1.41
MMP3P08254 RPS27P18-201ENST00000431701 247 ntBASIC6.25□□□□□ -1.41
MMP3P08254 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.25□□□□□ -1.41
MMP3P08254 AL500527.1-201ENST00000448532 255 ntBASIC6.25□□□□□ -1.41
MMP3P08254 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.25□□□□□ -1.41
MMP3P08254 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.25□□□□□ -1.41
MMP3P08254 RPS21P4-201ENST00000487122 248 ntBASIC6.25□□□□□ -1.41
MMP3P08254 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.25□□□□□ -1.41
MMP3P08254 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.25□□□□□ -1.41
MMP3P08254 AC072052.1-201ENST00000496556 306 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms