Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.44□□□□□ -1.38
COL2A1P02458 AC060780.2-201ENST00000589047 198 ntBASIC6.44□□□□□ -1.38
COL2A1P02458 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL2A1P02458 AC087763.1-201ENST00000603391 286 ntBASIC6.44□□□□□ -1.38
COL2A1P02458 AC100827.5-201ENST00000615883 426 ntBASIC6.44□□□□□ -1.38
COL2A1P02458 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL2A1P02458 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.44□□□□□ -1.38
COL2A1P02458 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL2A1P02458 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL2A1P02458 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
COL2A1P02458 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
COL2A1P02458 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL2A1P02458 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL2A1P02458 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COL2A1P02458 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL2A1P02458 AC013268.3-201ENST00000262716 2324 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 SNORA17.1-201ENST00000362945 126 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 RNU1-146P-201ENST00000364015 165 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.43□□□□□ -1.38
COL2A1P02458 RPL26P29-201ENST00000415623 438 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.43□□□□□ -1.38
COL2A1P02458 AL451063.1-201ENST00000450164 1133 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 RN7SL97P-201ENST00000486780 299 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.43□□□□□ -1.38
COL2A1P02458 AP004607.2-201ENST00000533949 322 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.43□□□□□ -1.38
COL2A1P02458 OR11J2P-201ENST00000555298 907 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.43□□□□□ -1.38
COL2A1P02458 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.43□□□□□ -1.38
COL2A1P02458 AC005341.1-201ENST00000571086 708 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 RN7SL356P-201ENST00000582228 248 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.43□□□□□ -1.38
COL2A1P02458 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.43□□□□□ -1.38
COL2A1P02458 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.43□□□□□ -1.38
COL2A1P02458 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.43□□□□□ -1.38
COL2A1P02458 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.43□□□□□ -1.38
COL2A1P02458 CYP4F35P-202ENST00000636121 390 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COL2A1P02458 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL2A1P02458 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COL2A1P02458 AL117378.2-201ENST00000622916 1337 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COL2A1P02458 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL2A1P02458 AC232271.1-201ENST00000602455 2715 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL2A1P02458 AC131971.1-201ENST00000332881 1482 ntBASIC6.43□□□□□ -1.38
COL2A1P02458 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.43□□□□□ -1.38
COL2A1P02458 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.43□□□□□ -1.38
COL2A1P02458 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 RPL23P2-201ENST00000320371 421 ntBASIC6.42□□□□□ -1.38
COL2A1P02458 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.42□□□□□ -1.38
COL2A1P02458 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.42□□□□□ -1.38
COL2A1P02458 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.42□□□□□ -1.38
COL2A1P02458 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.42□□□□□ -1.38
COL2A1P02458 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.42□□□□□ -1.38
COL2A1P02458 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.42□□□□□ -1.38
COL2A1P02458 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.42□□□□□ -1.38
COL2A1P02458 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.42□□□□□ -1.38
COL2A1P02458 MIR4646-201ENST00000580775 63 ntBASIC6.42□□□□□ -1.38
COL2A1P02458 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
COL2A1P02458 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.42□□□□□ -1.38
COL2A1P02458 AC095055.1-201ENST00000603472 1113 ntBASIC6.42□□□□□ -1.38
COL2A1P02458 AC074101.1-201ENST00000637861 241 ntBASIC6.42□□□□□ -1.38
COL2A1P02458 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
COL2A1P02458 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 AC006600.2-201ENST00000624834 2506 ntBASIC6.42□□□□□ -1.38
COL2A1P02458 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.42□□□□□ -1.38
COL2A1P02458 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.42□□□□□ -1.38
COL2A1P02458 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 AC011493.1-201ENST00000596753 1632 ntBASIC6.42□□□□□ -1.38
COL2A1P02458 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL2A1P02458 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
COL2A1P02458 AC092651.1-201ENST00000426110 312 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.41□□□□□ -1.38
COL2A1P02458 AC091390.1-201ENST00000433904 331 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.41□□□□□ -1.38
COL2A1P02458 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.41□□□□□ -1.38
COL2A1P02458 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.41□□□□□ -1.38
COL2A1P02458 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.41□□□□□ -1.38
COL2A1P02458 RN7SL188P-201ENST00000469842 285 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.41□□□□□ -1.38
COL2A1P02458 AC018552.1-201ENST00000562099 811 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.41□□□□□ -1.38
COL2A1P02458 AC006116.3-201ENST00000592968 361 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.41□□□□□ -1.38
COL2A1P02458 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.41□□□□□ -1.38
COL2A1P02458 AL445528.2-201ENST00000620582 470 ntBASIC6.41□□□□□ -1.38
COL2A1P02458 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
COL2A1P02458 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL2A1P02458 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms