Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 LINC01616-201ENST00000561816 2280 ntBASIC8.41□□□□□ -1.06
RAPGEF3O95398 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 OR4K12P-201ENST00000406538 961 ntBASIC8.41□□□□□ -1.06
RAPGEF3O95398 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 RPL23AP18-201ENST00000416139 468 ntBASIC8.41□□□□□ -1.06
RAPGEF3O95398 AC007562.1-201ENST00000421819 517 ntBASIC8.41□□□□□ -1.06
RAPGEF3O95398 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 AC023274.2-201ENST00000445264 521 ntBASIC8.41□□□□□ -1.06
RAPGEF3O95398 AC073072.2-201ENST00000447425 348 ntBASIC8.41□□□□□ -1.06
RAPGEF3O95398 snoU13.20-201ENST00000459180 104 ntBASIC8.41□□□□□ -1.06
RAPGEF3O95398 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 AC105384.2-201ENST00000508433 640 ntBASIC8.41□□□□□ -1.06
RAPGEF3O95398 AC112206.4-201ENST00000515142 405 ntBASIC8.41□□□□□ -1.06
RAPGEF3O95398 NMNAT1P5-201ENST00000559657 841 ntBASIC8.41□□□□□ -1.06
RAPGEF3O95398 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 AL034546.1-201ENST00000623740 3693 ntBASIC8.41□□□□□ -1.06
RAPGEF3O95398 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 AL137918.1-201ENST00000624542 1922 ntBASIC8.41□□□□□ -1.06
RAPGEF3O95398 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 UGT2B27P-201ENST00000505092 1620 ntBASIC8.4□□□□□ -1.06
RAPGEF3O95398 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
RAPGEF3O95398 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 SNORA17.1-201ENST00000362945 126 ntBASIC8.4□□□□□ -1.06
RAPGEF3O95398 MIR551A-201ENST00000385042 96 ntBASIC8.4□□□□□ -1.06
RAPGEF3O95398 MT-RNR1-201ENST00000389680 954 ntBASIC8.4□□□□□ -1.06
RAPGEF3O95398 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 AL353626.3-201ENST00000413399 657 ntBASIC8.4□□□□□ -1.06
RAPGEF3O95398 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 AC093655.2-201ENST00000425735 631 ntBASIC8.4□□□□□ -1.06
RAPGEF3O95398 AC092106.1-201ENST00000444291 373 ntBASIC8.4□□□□□ -1.06
RAPGEF3O95398 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RAPGEF3O95398 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 HPRT1P1-201ENST00000509498 657 ntBASIC8.4□□□□□ -1.06
RAPGEF3O95398 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 AL355974.3-201ENST00000617383 467 ntBASIC8.4□□□□□ -1.06
RAPGEF3O95398 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC8.4□□□□□ -1.06
RAPGEF3O95398 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RAPGEF3O95398 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RAPGEF3O95398 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RAPGEF3O95398 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
RAPGEF3O95398 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
RAPGEF3O95398 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC8.4□□□□□ -1.07
RAPGEF3O95398 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
RAPGEF3O95398 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RAPGEF3O95398 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RAPGEF3O95398 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RAPGEF3O95398 AL121768.1-201ENST00000613917 2544 ntBASIC8.39□□□□□ -1.07
RAPGEF3O95398 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RAPGEF3O95398 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RAPGEF3O95398 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 Y_RNA.110-201ENST00000363220 99 ntBASIC8.39□□□□□ -1.07
RAPGEF3O95398 RN7SKP113-201ENST00000363891 295 ntBASIC8.39□□□□□ -1.07
RAPGEF3O95398 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.39□□□□□ -1.07
RAPGEF3O95398 AC211486.3-201ENST00000412694 621 ntBASIC8.39□□□□□ -1.07
RAPGEF3O95398 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 MTND4P15-201ENST00000437913 1033 ntBASIC8.39□□□□□ -1.07
RAPGEF3O95398 AL138878.2-201ENST00000440581 1241 ntBASIC8.39□□□□□ -1.07
RAPGEF3O95398 AP002371.1-201ENST00000463604 433 ntBASIC8.39□□□□□ -1.07
RAPGEF3O95398 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 C1GALT1P3-201ENST00000522049 819 ntBASIC8.39□□□□□ -1.07
RAPGEF3O95398 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC8.39□□□□□ -1.07
RAPGEF3O95398 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RAPGEF3O95398 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms