Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MIR4311-201ENST00000580794 100 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 MIR5010-201ENST00000582846 120 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 H3F3BP2-201ENST00000583907 357 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC28A1O00337 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC28A1O00337 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC28A1O00337 AC021766.1-201ENST00000624404 741 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC28A1O00337 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SLC28A1O00337 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC28A1O00337 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SLC28A1O00337 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC28A1O00337 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SLC28A1O00337 AP001284.1-201ENST00000528393 2118 ntBASIC5.44□□□□□ -1.54
SLC28A1O00337 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SLC28A1O00337 LYARP1-201ENST00000436977 1501 ntBASIC5.43□□□□□ -1.54
SLC28A1O00337 AC090181.3-201ENST00000624777 1514 ntBASIC5.43□□□□□ -1.54
SLC28A1O00337 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC28A1O00337 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC28A1O00337 ABCC13-202ENST00000463099 3842 ntBASIC5.43□□□□□ -1.54
SLC28A1O00337 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC28A1O00337 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC28A1O00337 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC28A1O00337 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC28A1O00337 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
SLC28A1O00337 RIMKLBP2-201ENST00000424737 654 ntBASIC5.43□□□□□ -1.54
SLC28A1O00337 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC28A1O00337 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.43□□□□□ -1.54
SLC28A1O00337 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC28A1O00337 SEPT7P6-201ENST00000469999 1143 ntBASIC5.43□□□□□ -1.54
SLC28A1O00337 AC009120.1-201ENST00000493458 473 ntBASIC5.43□□□□□ -1.54
SLC28A1O00337 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC28A1O00337 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC28A1O00337 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC28A1O00337 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC28A1O00337 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.43□□□□□ -1.54
SLC28A1O00337 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC28A1O00337 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.43□□□□□ -1.54
SLC28A1O00337 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC28A1O00337 CYCSP38-201ENST00000559840 322 ntBASIC5.43□□□□□ -1.54
SLC28A1O00337 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.43□□□□□ -1.54
SLC28A1O00337 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC28A1O00337 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC28A1O00337 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
SLC28A1O00337 AL022394.1-201ENST00000606979 292 ntBASIC5.43□□□□□ -1.54
SLC28A1O00337 AC002044.3-201ENST00000623314 541 ntBASIC5.43□□□□□ -1.54
SLC28A1O00337 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SLC28A1O00337 AC022919.1-201ENST00000624979 626 ntBASIC5.43□□□□□ -1.54
SLC28A1O00337 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.43□□□□□ -1.54
SLC28A1O00337 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC28A1O00337 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC28A1O00337 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC28A1O00337 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
SLC28A1O00337 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC28A1O00337 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC28A1O00337 LINC02019-201ENST00000608605 2060 ntBASIC5.43□□□□□ -1.54
SLC28A1O00337 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SLC28A1O00337 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SLC28A1O00337 AC079097.1-201ENST00000512187 1399 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
SLC28A1O00337 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SLC28A1O00337 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC28A1O00337 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC28A1O00337 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SLC28A1O00337 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC28A1O00337 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC28A1O00337 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SLC28A1O00337 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC28A1O00337 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC28A1O00337 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC28A1O00337 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC28A1O00337 PWAR1-201ENST00000624188 2414 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SLC28A1O00337 RN7SKP171-201ENST00000364417 303 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 MIR1275-201ENST00000408770 80 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 RPS6P23-201ENST00000413224 722 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 RAB9AP4-201ENST00000415230 609 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC28A1O00337 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC28A1O00337 NDUFS5P5-201ENST00000437256 321 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 AMYP1-201ENST00000440059 1023 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 IGBP1P3-201ENST00000447449 1000 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 AL596266.1-201ENST00000448132 400 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC28A1O00337 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC28A1O00337 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC28A1O00337 OR5AM1P-201ENST00000532136 1032 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 AC079905.1-201ENST00000549280 475 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC28A1O00337 EIF1AXP2-201ENST00000555940 413 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 AL049874.4-201ENST00000557593 255 ntBASIC5.42□□□□□ -1.54
SLC28A1O00337 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC28A1O00337 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC28A1O00337 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC28A1O00337 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC28A1O00337 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC28A1O00337 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms