Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 MAPK10-328ENST00000641553 4009 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 MIR551A-201ENST00000385042 96 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 RNA5SP241-201ENST00000391326 114 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 RN7SKP240-201ENST00000410583 375 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AL590399.4-201ENST00000436561 601 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 RN7SL168P-201ENST00000463821 279 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 PPP1R11P1-201ENST00000486095 376 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 SNORA43.3-201ENST00000517240 103 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 CDC42P3-201ENST00000518493 633 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 LDHC-205ENST00000537486 583 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AP001496.3-201ENST00000580230 913 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 PPATP2-201ENST00000605635 508 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AL022394.1-201ENST00000606979 292 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AC026367.3-201ENST00000619032 590 ntBASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TRAV27A0A087WT01 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC091305.2-201ENST00000624049 1576 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 LYPLA1P3-201ENST00000402650 695 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AL133173.1-201ENST00000423458 397 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AKR1B10P1-201ENST00000425765 942 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AL662874.1-201ENST00000426065 230 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 CBX1P2-201ENST00000453841 458 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC109481.1-201ENST00000509173 282 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC109464.1-201ENST00000511091 819 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC092709.1-201ENST00000521355 1045 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 BCAS2P1-201ENST00000528022 632 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 TOMM20P1-201ENST00000534518 427 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC079600.1-201ENST00000550326 297 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 IGBP1P1-201ENST00000554337 1009 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 YES1P1-201ENST00000418510 1628 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms