Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 ADAM24P-201ENST00000398655 2101 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 AL162456.1-201ENST00000634535 2006 ntBASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS29Q9UBQ0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AL449283.1-201ENST00000602631 3403 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 CXADRP1-201ENST00000398098 1095 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 GAPDHP42-201ENST00000406848 981 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 RN7SKP240-201ENST00000410583 375 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 GPS2P1-201ENST00000411761 986 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AC117434.1-201ENST00000419971 836 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AC009506.2-201ENST00000420635 840 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AL450996.1-201ENST00000445574 1202 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AP000547.1-201ENST00000454360 617 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 RN7SL741P-201ENST00000482473 289 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AC012123.2-201ENST00000485809 248 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 SNORA43.3-201ENST00000517240 103 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 NANOGNBP2-201ENST00000544753 553 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AC023389.2-201ENST00000580031 955 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 MIR4433B-201ENST00000581329 102 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AL499605.1-201ENST00000604628 403 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AC010632.3-201ENST00000611377 369 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 CXADRP3-202ENST00000617265 1100 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 MIR193BHG-214ENST00000641765 509 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 LINC01963-201ENST00000562038 3148 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 NLRP3P1-201ENST00000622303 1785 ntBASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS29Q9UBQ0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 RN7SKP6-201ENST00000364795 319 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 HMGN1P20-201ENST00000411849 300 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 SLC20A1P1-201ENST00000413906 956 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 EEF1B2P8-201ENST00000414101 671 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 AC017078.1-201ENST00000416146 368 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 RPL24P2-201ENST00000421023 475 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 SUMO2P8-201ENST00000434672 286 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 RN7SKP70-201ENST00000516655 271 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 AP005431.1-201ENST00000618479 319 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms