Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC239367.2-201ENST00000447309 705 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 NDUFA5P8-201ENST00000449019 346 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 AL034374.2-201ENST00000605281 548 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 AC010928.1-201ENST00000592477 1447 ntBASIC5.53□□□□□ -1.52
CHD7Q9P2D1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 AC005154.2-201ENST00000438110 379 ntBASIC5.53□□□□□ -1.52
CHD7Q9P2D1 AP000797.2-201ENST00000475768 606 ntBASIC5.53□□□□□ -1.52
CHD7Q9P2D1 AC021106.1-201ENST00000509020 1058 ntBASIC5.53□□□□□ -1.52
CHD7Q9P2D1 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 AC125494.2-201ENST00000602431 657 ntBASIC5.53□□□□□ -1.52
CHD7Q9P2D1 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 MIR105-1-201ENST00000385222 81 ntBASIC5.53□□□□□ -1.52
CHD7Q9P2D1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 AL445687.2-201ENST00000458156 728 ntBASIC5.53□□□□□ -1.52
CHD7Q9P2D1 GAPDHP56-201ENST00000506031 988 ntBASIC5.53□□□□□ -1.52
CHD7Q9P2D1 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.53□□□□□ -1.52
CHD7Q9P2D1 OR8G5-201ENST00000524943 1041 ntBASIC5.53□□□□□ -1.52
CHD7Q9P2D1 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 MIR3667-201ENST00000581025 74 ntBASIC5.53□□□□□ -1.52
CHD7Q9P2D1 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CHD7Q9P2D1 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 SNORA70F-201ENST00000384142 135 ntBASIC5.52□□□□□ -1.53
CHD7Q9P2D1 SLC25A15P5-201ENST00000508033 253 ntBASIC5.52□□□□□ -1.53
CHD7Q9P2D1 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 RPL17P50-201ENST00000396131 546 ntBASIC5.52□□□□□ -1.53
CHD7Q9P2D1 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 ATG4AP1-201ENST00000416893 538 ntBASIC5.52□□□□□ -1.53
CHD7Q9P2D1 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.52□□□□□ -1.53
CHD7Q9P2D1 RPS29P10-201ENST00000439197 166 ntBASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AP002530.1-201ENST00000405705 684 ntBASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AC116036.1-201ENST00000412199 367 ntBASIC5.52□□□□□ -1.53
CHD7Q9P2D1 RPS17P5-201ENST00000498293 408 ntBASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 SCARNA9-201ENST00000530422 353 ntBASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHD7Q9P2D1 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms