Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRTM1Q9HBL6 AC079097.1-201ENST00000512187 1399 ntBASIC5.39□□□□□ -1.55
LRTM1Q9HBL6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRTM1Q9HBL6 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.39□□□□□ -1.55
LRTM1Q9HBL6 AC006206.1-201ENST00000544842 3387 ntBASIC5.39□□□□□ -1.55
LRTM1Q9HBL6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
LRTM1Q9HBL6 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
LRTM1Q9HBL6 AC144833.1-201ENST00000567953 4089 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 MIR1203-201ENST00000408812 85 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 RIMKLBP2-201ENST00000424737 654 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AC073465.2-201ENST00000440938 498 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 IGBP1P3-201ENST00000447449 1000 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AL359839.1-201ENST00000451975 1160 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 RPSAP51-201ENST00000497462 645 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AP000648.1-201ENST00000529682 397 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 OR4A43P-201ENST00000532938 908 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AC023389.2-201ENST00000580031 955 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AC063977.5-201ENST00000601044 974 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 RPL12P48-201ENST00000605620 304 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AL031601.1-201ENST00000605702 394 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AP000432.2-201ENST00000624164 2048 ntBASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRTM1Q9HBL6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AC006600.2-201ENST00000624834 2506 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AC016745.2-201ENST00000608834 3443 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 MIR133A2-201ENST00000347538 102 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AL009179.1-201ENST00000406085 265 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 RPS3P2-201ENST00000421346 701 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AL035660.1-201ENST00000422041 222 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AL022331.1-201ENST00000429025 477 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 RPL7P56-201ENST00000429441 717 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 RN7SL177P-201ENST00000476596 299 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AC022215.1-201ENST00000481770 362 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 NENFP3-201ENST00000503735 313 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AC079064.1-201ENST00000528365 362 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 H3F3BP2-201ENST00000583907 357 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AL162574.1-201ENST00000615702 950 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 OR8G3P-202ENST00000641572 1255 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 CIR1P2-201ENST00000514821 1342 ntBASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
LRTM1Q9HBL6 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRTM1Q9HBL6 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms