Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 MIR6813-201ENST00000621638 56 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 MTCO1P7-201ENST00000419523 1542 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 UGT2B26P-201ENST00000508672 1613 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 HMGB3P7-201ENST00000400214 611 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 SNRPEP6-201ENST00000407465 277 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 RPL35AP3-201ENST00000414680 288 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AC006065.1-201ENST00000422539 802 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AL139158.1-201ENST00000424719 340 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AC073508.1-201ENST00000428866 656 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AL353662.1-201ENST00000439099 327 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 CALM1P2-201ENST00000452941 448 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 MTCO1P31-201ENST00000506355 492 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 MTCYBP19-201ENST00000517463 1124 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AC078899.1-201ENST00000521432 1185 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 LSM1P2-201ENST00000604911 322 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AL450270.1-201ENST00000606160 391 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AL451049.1-201ENST00000608672 497 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AL031658.2-201ENST00000616850 651 ntBASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
BRF2Q9HAW0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 RNU6-31P-201ENST00000384388 108 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 DPPA2P2-201ENST00000418220 897 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 RPS4XP5-201ENST00000419038 768 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 RPL23AP4-201ENST00000427757 463 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 MTCYBP12-201ENST00000440559 1134 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 FRG2FP-204ENST00000453982 852 ntBASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.67□□□□□ -1.5
BRF2Q9HAW0 AC044810.1-201ENST00000480271 711 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms