Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC092709.1-201ENST00000521355 1045 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC011445.2-201ENST00000599274 173 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AL096712.1-201ENST00000614561 159 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC090607.5-201ENST00000615692 224 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC091305.2-201ENST00000624049 1576 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC012078.1-201ENST00000405035 1646 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC144833.1-201ENST00000567953 4089 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 HYALP1-201ENST00000417674 1279 ntBASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 AK4P4-201ENST00000419465 646 ntBASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 AL662874.1-201ENST00000426065 230 ntBASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 AL022331.1-201ENST00000429025 477 ntBASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 PMS2P3-207ENST00000529061 717 ntBASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 AL353796.1-201ENST00000561542 3241 ntBASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 AC092121.1-201ENST00000569452 202 ntBASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.1□□□□□ -1.59
RSPO3Q9BXY4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 AC010401.2-201ENST00000575137 4934 ntBASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 NEPNP-201ENST00000404786 1371 ntBASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 HMGN1P20-201ENST00000411849 300 ntBASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 AC117434.1-201ENST00000419971 836 ntBASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 AC104843.2-201ENST00000427666 297 ntBASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 AC090804.1-201ENST00000448870 490 ntBASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 AC108751.3-201ENST00000461814 1020 ntBASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 AC011476.1-201ENST00000466725 307 ntBASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.09□□□□□ -1.59
RSPO3Q9BXY4 SNRPCP3-201ENST00000474888 476 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms