Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC000089.1-201ENST00000424559 801 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC097499.1-201ENST00000444277 208 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 TPMTP4-201ENST00000450749 678 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC093899.1-201ENST00000457984 376 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 RN7SL372P-201ENST00000461982 298 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 UOX-201ENST00000471089 899 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 RN7SL654P-201ENST00000479178 292 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 DSTNP2-201ENST00000504533 515 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 SNX18P23-201ENST00000510867 677 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 PCNPP1-201ENST00000552501 511 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC006362.1-201ENST00000567392 174 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 MIR5708-201ENST00000579723 85 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 MIR3611-201ENST00000584484 83 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AP002345.2-201ENST00000609961 904 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 FRG1HP-204ENST00000617940 757 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AL035661.1-201ENST00000620459 1144 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC015804.1-201ENST00000622935 435 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC135068.11-201ENST00000636378 921 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AL133243.4-201ENST00000623116 3109 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC087359.1-201ENST00000508335 1740 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC011503.2-201ENST00000594230 1500 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 CASC19-243ENST00000641588 1546 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC005261.2-201ENST00000593427 4258 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 AC095038.1-201ENST00000429248 1591 ntBASIC6.44□□□□□ -1.38
PTCHD1Q96NR3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 NCOA4P3-201ENST00000513203 1877 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC005839.1-201ENST00000624148 3213 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC090220.1-201ENST00000593078 1699 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC004023.1-201ENST00000561473 1744 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 Y_RNA.3-201ENST00000362331 103 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 LDHAP5-201ENST00000394996 622 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 CYCSP17-201ENST00000407870 315 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 RN7SKP91-201ENST00000410852 288 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 LINC01347-201ENST00000417964 355 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 E2F6P1-201ENST00000428850 745 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 RPS24P1-201ENST00000438550 371 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 MTND3P1-201ENST00000441336 220 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AL591503.2-201ENST00000442314 1005 ntBASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.43□□□□□ -1.38
PTCHD1Q96NR3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms