Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC021678.3-201ENST00000517893 476 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC011853.1-201ENST00000518911 454 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AGGF1P7-201ENST00000562369 913 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 FAM60CP-201ENST00000591086 664 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC079791.1-201ENST00000605356 973 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC073593.1-201ENST00000624500 411 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 UGT2B24P-201ENST00000514441 1597 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC114774.1-201ENST00000507410 1770 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 DNM1P47-203ENST00000571780 12667 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AL159987.1-201ENST00000347911 293 ntBASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 SUGT1P2-201ENST00000379452 992 ntBASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 RNU6-891P-201ENST00000384280 111 ntBASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AL158827.1-201ENST00000416300 391 ntBASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AC009120.1-201ENST00000493458 473 ntBASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 DUTP1-201ENST00000493631 470 ntBASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 RPS17P5-201ENST00000498293 408 ntBASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 OR5H7P-201ENST00000514084 930 ntBASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AC015689.2-201ENST00000528172 1738 ntBASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 SMG1P7-201ENST00000565246 2704 ntBASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AC009303.3-201ENST00000591103 736 ntBASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 GMCL1P2-201ENST00000605230 823 ntBASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.61□□□□□ -1.51
PDLIM5Q96HC4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 AL356317.1-201ENST00000396110 1436 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 SSXP3-201ENST00000442971 1300 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 RN7SKP275-201ENST00000364626 301 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 NPM1P37-201ENST00000403105 874 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 Z84478.1-201ENST00000438230 1219 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 CYCSP51-201ENST00000443545 318 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 AC105918.1-201ENST00000474399 838 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 ATP5LP5-201ENST00000483050 299 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 AC111000.6-201ENST00000514471 709 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms