Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 SNORD125-201ENST00000459538 96 ntBASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 AC015720.2-201ENST00000567709 334 ntBASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 AC012616.1-201ENST00000600294 197 ntBASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 MIR6768-201ENST00000610734 72 ntBASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ECHDC3Q96DC8 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 AL009179.1-201ENST00000406085 265 ntBASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 AL513325.1-201ENST00000417716 1034 ntBASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 AC012075.1-201ENST00000436549 580 ntBASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 AL359955.1-201ENST00000455242 3275 ntBASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 UGT2B24P-201ENST00000514441 1597 ntBASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 GAPDHP62-201ENST00000515313 990 ntBASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 RNA5SP362-201ENST00000516048 118 ntBASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 AC087516.1-201ENST00000561236 2428 ntBASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 AL161912.4-201ENST00000623889 2468 ntBASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 AC232271.1-201ENST00000602455 2715 ntBASIC5.61□□□□□ -1.51
ECHDC3Q96DC8 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 OR4F13P-202ENST00000560066 2054 ntBASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 AC012078.1-201ENST00000405035 1646 ntBASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 RNA5SP234-201ENST00000363916 119 ntBASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 RN7SKP28-201ENST00000364770 305 ntBASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 GABARAPL3-201ENST00000412799 354 ntBASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 H3F3BP2-201ENST00000583907 357 ntBASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 AL118522.2-201ENST00000616045 615 ntBASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 MIR6729-201ENST00000618194 65 ntBASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 AL049767.1-202ENST00000637826 242 ntBASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms