Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 MAPK10-350ENST00000641777 965 ntBASIC6.69□□□□□ -1.34
SNED1Q8TER0 AC009779.8-201ENST00000641684 4384 ntBASIC6.69□□□□□ -1.34
SNED1Q8TER0 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.69□□□□□ -1.34
SNED1Q8TER0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 AL117378.2-201ENST00000622916 1337 ntBASIC6.69□□□□□ -1.34
SNED1Q8TER0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNED1Q8TER0 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNED1Q8TER0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SNED1Q8TER0 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNED1Q8TER0 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SNED1Q8TER0 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNED1Q8TER0 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SNED1Q8TER0 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
SNED1Q8TER0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.68□□□□□ -1.34
SNED1Q8TER0 MAPK10-304ENST00000641341 3984 ntBASIC6.68□□□□□ -1.34
SNED1Q8TER0 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
SNED1Q8TER0 RNA5SP326-201ENST00000363209 110 ntBASIC6.68□□□□□ -1.34
SNED1Q8TER0 SNORD1C-201ENST00000363315 78 ntBASIC6.68□□□□□ -1.34
SNED1Q8TER0 SNORA51.8-201ENST00000384234 132 ntBASIC6.68□□□□□ -1.34
SNED1Q8TER0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.68□□□□□ -1.34
SNED1Q8TER0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.68□□□□□ -1.34
SNED1Q8TER0 TRY2P-201ENST00000448860 689 ntBASIC6.68□□□□□ -1.34
SNED1Q8TER0 RPS7P6-201ENST00000485777 579 ntBASIC6.68□□□□□ -1.34
SNED1Q8TER0 CEACAMP10-202ENST00000495431 496 ntBASIC6.68□□□□□ -1.34
SNED1Q8TER0 AC078899.1-201ENST00000521432 1185 ntBASIC6.68□□□□□ -1.34
SNED1Q8TER0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.68□□□□□ -1.34
SNED1Q8TER0 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.68□□□□□ -1.34
SNED1Q8TER0 AC105105.5-201ENST00000622635 1294 ntBASIC6.68□□□□□ -1.34
SNED1Q8TER0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SNED1Q8TER0 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SNED1Q8TER0 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNED1Q8TER0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SNED1Q8TER0 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNED1Q8TER0 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SNED1Q8TER0 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SNED1Q8TER0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.68□□□□□ -1.34
SNED1Q8TER0 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.68□□□□□ -1.34
SNED1Q8TER0 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNED1Q8TER0 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SNED1Q8TER0 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.68□□□□□ -1.34
SNED1Q8TER0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNED1Q8TER0 SNURFL-201ENST00000309296 343 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 AC006466.1-201ENST00000438721 289 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 AC011753.3-201ENST00000443436 406 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 GYG1P1-201ENST00000460864 698 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 AL672167.3-201ENST00000465951 960 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 FTH1P2-201ENST00000466086 412 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 RN7SKP253-201ENST00000516424 309 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 AC063949.1-201ENST00000552900 865 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNED1Q8TER0 PRNCR1-201ENST00000635449 12727 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNED1Q8TER0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNED1Q8TER0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNED1Q8TER0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNED1Q8TER0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNED1Q8TER0 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNED1Q8TER0 INTS6P1-201ENST00000504674 2530 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNED1Q8TER0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNED1Q8TER0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNED1Q8TER0 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNED1Q8TER0 AC013442.1-201ENST00000397347 228 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 RPL23AP17-201ENST00000401064 499 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 AC093162.1-201ENST00000419682 124 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 AC092651.1-201ENST00000426110 312 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 VN1R21P-201ENST00000426703 765 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 RHOT1P3-201ENST00000436571 331 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 GAPDHP25-201ENST00000447061 1001 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 RPL12P39-201ENST00000455456 496 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms