Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AC025809.2-201ENST00000625085 1802 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AL663074.2-201ENST00000440621 479 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 RNA5SP228-201ENST00000516232 133 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 GTF2IP4-201ENST00000453092 2054 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 DCN-218ENST00000551354 2924 ntTSL 3 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AL033543.1-201ENST00000623440 13454 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 BPHL-201ENST00000380368 797 ntTSL 5 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 RNU4-34P-201ENST00000410431 124 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AC245884.2-201ENST00000426257 404 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 HNRNPDLP2-201ENST00000455248 751 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AC090236.2-201ENST00000587933 1101 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AC004890.3-201ENST00000605566 1095 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 CD86-204ENST00000469710 1604 ntTSL 2 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AL672167.1-203ENST00000641299 2975 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AC137056.2-201ENST00000624055 1958 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AL137141.1-201ENST00000624622 4836 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 HNRNPA3P4-201ENST00000427514 803 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 MGST2-204ENST00000506797 634 ntTSL 2 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 OR7E158P-201ENST00000524483 910 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AC110056.1-201ENST00000525759 911 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AC136428.4-201ENST00000634254 1155 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 FO082842.1-201ENST00000423552 1370 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 MIR130A-201ENST00000385274 89 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 RPL7AP6-201ENST00000477943 801 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AC037198.3-201ENST00000616754 526 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AL162456.1-201ENST00000634535 2006 ntBASIC1.73□□□□□ -2.13
SYNE1Q8NF91 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SYNE1Q8NF91 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 RPSAP35-201ENST00000413753 818 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 OR2AM1P-201ENST00000422137 422 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 RPL7L1P3-201ENST00000455249 689 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 CDC42P3-201ENST00000518493 633 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AC007346.2-201ENST00000564816 892 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 METTL15-211ENST00000634762 718 ntTSL 5 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AC087565.3-203ENST00000641018 837 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 AP000432.2-201ENST00000624164 2048 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 RNA5SP211-201ENST00000365516 117 ntBASIC1.72□□□□□ -2.13
SYNE1Q8NF91 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC1.72□□□□□ -2.13
SYNE1Q8NF91 RPL35AP24-201ENST00000413846 330 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms