Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC008957.3-201ENST00000624112 2242 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 RN7SKP128-201ENST00000364270 303 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 RNA5SP500-201ENST00000364486 119 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 ATP5F1P6-201ENST00000402768 767 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 RPL35AP3-201ENST00000414680 288 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AC092570.3-201ENST00000420113 693 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 XKRY2-201ENST00000442362 1093 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 FABP5P6-201ENST00000510588 409 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AL121594.4-201ENST00000556211 1196 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 OR51C1P-201ENST00000608504 942 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AL139407.1-201ENST00000613826 1175 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 PABPC1P8-201ENST00000452851 2086 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AL157831.2-201ENST00000564681 3095 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AL033543.1-201ENST00000623440 13454 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 AL022323.4-201ENST00000623980 13120 ntBASIC7.27□□□□□ -1.25
SMC1BQ8NDV3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 RNA5SP375-201ENST00000362975 119 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC009804.1-201ENST00000400949 179 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 HMGA1P8-201ENST00000414130 321 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 NME1P1-201ENST00000420914 382 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 RPL34P27-201ENST00000428810 349 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 MTATP6P17-201ENST00000431030 672 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC006466.1-201ENST00000438721 289 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 RPS23P9-201ENST00000448848 438 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 OFD1P3Y-201ENST00000453312 783 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 RN7SL72P-201ENST00000460697 269 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 RPS29P22-201ENST00000472363 168 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 RPL7P6-201ENST00000480903 738 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 GTF2IP9-201ENST00000502460 301 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC095057.1-201ENST00000507583 168 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC103833.1-201ENST00000517442 172 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 OR8X1P-201ENST00000534542 869 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC233266.2-201ENST00000567067 528 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 MIR4646-201ENST00000580775 63 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 MIR4436B2-201ENST00000581415 91 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 MIR4436B1-201ENST00000583272 91 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 CLIC4P2-201ENST00000601934 717 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AF230666.2-201ENST00000602328 725 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AL096803.3-201ENST00000609032 532 ntBASIC7.26□□□□□ -1.25
SMC1BQ8NDV3 AC008115.3-201ENST00000614874 549 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms