Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 MTND5P23-201ENST00000430812 1655 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AC245291.3-201ENST00000443400 292 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AC083899.1-201ENST00000454465 3819 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AL049874.2-201ENST00000492636 288 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 GAPDHP71-201ENST00000511530 1003 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 MAST4-IT1-201ENST00000514241 658 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 SNORD116-30-201ENST00000516468 85 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AC131935.1-201ENST00000524621 333 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 EIF4A2P5-201ENST00000529914 499 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AC068993.1-201ENST00000546724 589 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AL359219.2-201ENST00000555184 348 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 DHFRP1-201ENST00000579682 559 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 MIR4660-201ENST00000583549 74 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AL121890.2-201ENST00000617644 465 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 FAM27E2-201ENST00000619668 403 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AP000542.2-201ENST00000623199 6179 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 AC093775.1-201ENST00000624154 1868 ntBASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CCDC71LQ8N9Z2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC245100.2-201ENST00000454544 1679 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 BMS1P3-201ENST00000372011 932 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 MIR130A-201ENST00000385274 89 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 GAPDHP15-201ENST00000398586 975 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AL356968.2-201ENST00000412769 1257 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 NDUFB4P8-201ENST00000435351 367 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 TUBB4BP6-201ENST00000437576 479 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 RPS10P18-201ENST00000442662 495 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC234771.2-201ENST00000445718 597 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC239798.3-201ENST00000454459 408 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 RBMY2HP-201ENST00000457961 720 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 RN7SL515P-201ENST00000463999 297 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 H3F3AP5-201ENST00000475267 429 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC108103.1-201ENST00000511286 446 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 RNU4-18P-201ENST00000516751 149 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 SEPT10P1-201ENST00000517342 1162 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AGGF1P7-201ENST00000562369 913 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms