Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RPL38P3-201ENST00000484463 213 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC113367.2-201ENST00000505749 160 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC027338.1-201ENST00000514840 825 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 RNU6-943P-201ENST00000516960 98 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC078899.1-201ENST00000521432 1185 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 OR4A41P-201ENST00000533053 928 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AL359219.2-201ENST00000555184 348 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 OR1E3-201ENST00000575608 948 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 MIR744-201ENST00000578242 98 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 RN7SL230P-201ENST00000580835 303 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 OR1AB1P-201ENST00000585564 761 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC068768.2-201ENST00000602352 343 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC097641.3-201ENST00000613523 464 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC006927.4-201ENST00000639187 543 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 PSG10P-201ENST00000501199 1500 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC011933.2-201ENST00000578539 2790 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 THAP12P8-201ENST00000447914 2115 ntBASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.47□□□□□ -1.53
CLIP4Q8N3C7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLIP4Q8N3C7 AL603750.1-201ENST00000624216 1717 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 RN7SKP184-201ENST00000362348 333 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 RN7SKP69-201ENST00000365390 305 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 GCNT6-201ENST00000379591 934 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AL158827.1-201ENST00000416300 391 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 REREP1Y-201ENST00000422655 198 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AL139158.1-201ENST00000424719 340 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC099677.3-201ENST00000427081 395 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC023141.6-201ENST00000429418 337 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 RPSAP65-201ENST00000429660 595 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC096632.2-201ENST00000438139 1239 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 REREP2Y-201ENST00000439103 200 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 RPS7P3-201ENST00000443360 580 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 GAPDHP14-201ENST00000450472 937 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC044810.1-201ENST00000480271 711 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC092902.1-201ENST00000486999 259 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 RN7SL612P-201ENST00000497704 295 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC008629.2-201ENST00000503783 483 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 MIR2117-201ENST00000516780 80 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC138701.1-201ENST00000524329 714 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC121758.1-202ENST00000556917 658 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC023158.1-201ENST00000561632 1025 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC005828.7-201ENST00000607331 556 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
CLIP4Q8N3C7 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms