Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 BX284613.1-201ENST00000452221 1641 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AC068870.1-201ENST00000563737 2455 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 DNM1P47-203ENST00000571780 12667 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AL121886.1-201ENST00000358609 435 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 MIR323A-201ENST00000362199 86 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 U3.10-201ENST00000364459 214 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 RN7SKP269-201ENST00000365545 319 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 PEX12P1-201ENST00000400284 1048 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 GAPDHP42-201ENST00000406848 981 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 RN7SKP17-201ENST00000411242 351 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AL354868.1-201ENST00000417077 482 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 LDHBP2-201ENST00000456969 1005 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 NPM1P28-201ENST00000492269 840 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AC026782.2-201ENST00000510845 636 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 PMS2P3-207ENST00000529061 717 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AC115989.2-201ENST00000578640 563 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AC011445.2-201ENST00000599274 173 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AL157762.1-201ENST00000619612 415 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AL691477.1-201ENST00000624398 162 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AP000550.3-201ENST00000637734 379 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 LINC01963-201ENST00000562038 3148 ntBASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
C9orf40Q8IXQ3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 SNORA81-201ENST00000408493 178 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AL513325.1-201ENST00000417716 1034 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 RNF10P1-201ENST00000418589 369 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AC244033.1-201ENST00000426826 870 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 NANOGP9-201ENST00000439890 892 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AL390119.1-201ENST00000440329 312 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AC019185.1-201ENST00000442718 389 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AL596266.1-201ENST00000448132 400 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 PPIAP20-201ENST00000449839 135 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 RN7SL466P-201ENST00000497546 295 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 MTCO3P42-201ENST00000509488 518 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AC106872.4-201ENST00000510050 523 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 MTCO3P39-201ENST00000514812 518 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 RNA5SP362-201ENST00000516048 118 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms