Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 VTI1BP4-201ENST00000427516 527 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AL512637.1-201ENST00000439523 1231 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AL157827.1-201ENST00000447622 132 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 CLIC4P1-201ENST00000453177 535 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC020779.1-201ENST00000478757 796 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 HMGB1P3-201ENST00000502802 616 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC010343.2-201ENST00000510162 224 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 RNA5SP228-201ENST00000516232 133 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 SNORA74.1-201ENST00000516320 180 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC125612.1-201ENST00000547580 377 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 MIR3154-201ENST00000577829 84 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 RPL29P33-201ENST00000587474 316 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 MIR6806-201ENST00000622141 64 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC010325.3-201ENST00000641084 394 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AL355488.2-201ENST00000609909 2850 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC107027.3-201ENST00000565095 3473 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 DDX6P1-205ENST00000441966 1436 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 PSMC1P6-201ENST00000477233 1319 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 RNU6-666P-201ENST00000363499 107 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 RN7SKP224-201ENST00000364140 325 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 MRPS6P2-201ENST00000381143 370 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 RNU6-225P-201ENST00000384613 103 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 RN7SKP86-201ENST00000410454 332 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 SETP15-201ENST00000412724 337 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC009302.1-201ENST00000417147 390 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC009506.2-201ENST00000420635 840 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 RPSAP40-201ENST00000442343 891 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC092601.1-201ENST00000444526 383 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 CCNJP1-201ENST00000450600 1149 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 RAB28P2-201ENST00000454299 641 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 OSTCP1-201ENST00000455507 450 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 RN7SL284P-201ENST00000498823 275 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 HMGB1P46-201ENST00000520062 610 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC022884.3-201ENST00000579571 248 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 MIR132-201ENST00000591554 101 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms