Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MIR6778-201ENST00000617912 73 ntBASIC7.24□□□□□ -1.25
RNF43Q68DV7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF43Q68DV7 AC090617.9-201ENST00000623751 147 ntBASIC7.24□□□□□ -1.25
RNF43Q68DV7 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF43Q68DV7 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF43Q68DV7 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF43Q68DV7 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF43Q68DV7 AL031123.3-201ENST00000623345 1837 ntBASIC7.24□□□□□ -1.25
RNF43Q68DV7 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF43Q68DV7 AC008432.1-201ENST00000615912 1320 ntBASIC7.24□□□□□ -1.25
RNF43Q68DV7 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF43Q68DV7 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
RNF43Q68DV7 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF43Q68DV7 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC102941.1-201ENST00000567616 1537 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 AL445991.1-201ENST00000450381 475 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 FGF7P6-202ENST00000451282 293 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 RPL23AP23-201ENST00000452590 471 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC099670.1-201ENST00000455141 783 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 RPS4XP6-201ENST00000477670 797 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC114324.2-202ENST00000503812 134 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 DSTNP2-201ENST00000504533 515 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC116917.1-201ENST00000520558 305 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 NDUFS5P6-201ENST00000529136 295 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 OR8I1P-201ENST00000529291 931 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC084757.1-201ENST00000559987 490 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC104229.1-201ENST00000561364 255 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC021483.2-201ENST00000567415 758 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 MIR3135A-201ENST00000578460 77 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 MIR5095-201ENST00000578844 88 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 AL078623.1-201ENST00000602702 907 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 CLPTM1LP1-201ENST00000604519 484 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 HMGB1P51-201ENST00000605166 638 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC104184.1-201ENST00000607513 721 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 AL451074.6-201ENST00000608512 729 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 AL445423.1-201ENST00000609941 536 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 Z99129.1-201ENST00000612510 255 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC063943.3-201ENST00000615562 356 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 AC091544.5-201ENST00000620192 3815 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 LINC01808-202ENST00000641680 1116 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 AL021877.2-201ENST00000624442 10684 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF43Q68DV7 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 ZNF833P-201ENST00000424938 1494 ntBASIC7.23□□□□□ -1.25
RNF43Q68DV7 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.23□□□□□ -1.25
RNF43Q68DV7 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RNF43Q68DV7 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF43Q68DV7 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF43Q68DV7 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.22□□□□□ -1.25
RNF43Q68DV7 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF43Q68DV7 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RNF43Q68DV7 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.22□□□□□ -1.25
RNF43Q68DV7 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.22□□□□□ -1.25
RNF43Q68DV7 AL157700.1-201ENST00000561973 1432 ntBASIC7.22□□□□□ -1.25
RNF43Q68DV7 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF43Q68DV7 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.22□□□□□ -1.25
RNF43Q68DV7 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.22□□□□□ -1.25
RNF43Q68DV7 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
RNF43Q68DV7 RNU4-76P-201ENST00000364509 141 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms