Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 snoU13.20-201ENST00000459180 104 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 snoU13.22-201ENST00000459428 104 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 AC022034.3-201ENST00000471393 478 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 RPL23AP72-201ENST00000492447 435 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 AC026402.1-201ENST00000513642 170 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.84□□□□□ -1.63
LRRK2Q5S007 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.84□□□□□ -1.63
LRRK2Q5S007 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRRK2Q5S007 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.84□□□□□ -1.63
LRRK2Q5S007 AC134349.2-201ENST00000535136 910 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 AP006289.1-201ENST00000538089 277 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 AC015818.6-201ENST00000584274 634 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 AC137695.1-201ENST00000604126 489 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 MIR92B-201ENST00000607575 96 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 AC012254.5-201ENST00000623573 478 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
LRRK2Q5S007 AC144833.1-201ENST00000567953 4089 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 BIN2P1-201ENST00000504996 1530 ntBASIC4.84□□□□□ -1.63
LRRK2Q5S007 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.84□□□□□ -1.63
LRRK2Q5S007 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRRK2Q5S007 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC4.84□□□□□ -1.63
LRRK2Q5S007 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.63
LRRK2Q5S007 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC4.84□□□□□ -1.63
LRRK2Q5S007 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRRK2Q5S007 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRRK2Q5S007 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC4.84□□□□□ -1.63
LRRK2Q5S007 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC4.84□□□□□ -1.63
LRRK2Q5S007 MIR133B-201ENST00000362210 119 ntBASIC4.84□□□□□ -1.64
LRRK2Q5S007 SNORA17.1-201ENST00000362945 126 ntBASIC4.84□□□□□ -1.64
LRRK2Q5S007 RNU1-43P-201ENST00000365052 165 ntBASIC4.84□□□□□ -1.64
LRRK2Q5S007 AC009480.2-201ENST00000422916 432 ntBASIC4.84□□□□□ -1.64
LRRK2Q5S007 RSL24D1P6-201ENST00000426934 401 ntBASIC4.84□□□□□ -1.64
LRRK2Q5S007 RPS3AP38-201ENST00000435889 763 ntBASIC4.84□□□□□ -1.64
LRRK2Q5S007 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LRRK2Q5S007 OR11I1P-201ENST00000486033 954 ntBASIC4.84□□□□□ -1.64
LRRK2Q5S007 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.84□□□□□ -1.64
LRRK2Q5S007 AC022726.2-201ENST00000634673 547 ntBASIC4.84□□□□□ -1.64
LRRK2Q5S007 AC099654.6-201ENST00000636487 512 ntBASIC4.84□□□□□ -1.64
LRRK2Q5S007 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LRRK2Q5S007 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
LRRK2Q5S007 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.64
LRRK2Q5S007 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.84□□□□□ -1.64
LRRK2Q5S007 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LRRK2Q5S007 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
LRRK2Q5S007 AC092821.3-202ENST00000641304 2767 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRK2Q5S007 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRK2Q5S007 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRK2Q5S007 AF131215.2-201ENST00000531549 1710 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRK2Q5S007 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 AL022237.1-201ENST00000446663 358 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 IGKV1OR22-5-201ENST00000458718 354 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 TPM3P3-201ENST00000521343 354 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 AC008147.3-201ENST00000548666 354 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 AC106730.2-201ENST00000566641 540 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 INTS6P1-201ENST00000504674 2530 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRK2Q5S007 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRK2Q5S007 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRK2Q5S007 AC104964.3-201ENST00000606115 2860 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRK2Q5S007 AP002364.1-201ENST00000623330 3386 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRK2Q5S007 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 AL031123.3-201ENST00000623345 1837 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 ZNF658B-201ENST00000602828 3408 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRK2Q5S007 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRK2Q5S007 AC079741.1-201ENST00000321498 212 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 RN7SKP6-201ENST00000364795 319 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 SNORA48.7-201ENST00000391302 135 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 RPS27AP7-201ENST00000422792 455 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 RPL10P17-201ENST00000453852 316 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 CYCSP29-201ENST00000533731 318 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
LRRK2Q5S007 MIR4429-201ENST00000580105 73 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 AL356752.1-201ENST00000615844 593 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 AC109583.2-201ENST00000617367 129 ntBASIC4.83□□□□□ -1.64
LRRK2Q5S007 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 453.3 ms