Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC012078.1-201ENST00000405035 1646 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 OR7E101P-201ENST00000400428 513 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AL009179.1-201ENST00000406085 265 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC009784.1-201ENST00000426484 460 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 RPS27AP6-201ENST00000427962 448 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 RPL7P56-201ENST00000429441 717 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC079807.1-201ENST00000429993 481 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC073465.2-201ENST00000440938 498 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 AP006222.1-205ENST00000450734 457 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC144530.1-201ENST00000452862 555 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC084754.1-201ENST00000463466 464 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 RN7SL583P-201ENST00000475692 287 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 RPS3AP15-201ENST00000483874 781 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 SNORA70.20-201ENST00000516848 126 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 MRPS16P1-201ENST00000523462 412 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC079064.1-201ENST00000528365 362 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC010632.3-201ENST00000611377 369 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 RN7SL544P-201ENST00000617232 284 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 RN7SL763P-201ENST00000620922 284 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AL390318.1-201ENST00000624564 687 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC087565.3-203ENST00000641018 837 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 GVINP1-202ENST00000531871 7271 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 AL359715.3-201ENST00000569267 2123 ntBASIC5.35□□□□□ -1.55
HMGCS1Q01581 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS1Q01581 SRRM1P3-201ENST00000426911 2678 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 MT-RNR2-201ENST00000387347 1559 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS1Q01581 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS1Q01581 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC016745.2-201ENST00000608834 3443 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS1Q01581 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS1Q01581 OR52B3P-201ENST00000314715 928 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 RN7SKP15-201ENST00000364742 309 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 RPS3P2-201ENST00000421346 701 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 IPPKP1-201ENST00000422501 768 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 RIMKLBP2-201ENST00000424737 654 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 IGBP1P3-201ENST00000447449 1000 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCS1Q01581 RN7SL188P-201ENST00000469842 285 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC087672.1-201ENST00000479876 766 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 RNU6-964P-201ENST00000516524 69 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC009237.13-201ENST00000603193 276 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC100767.2-201ENST00000604840 693 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 AL034374.2-201ENST00000605281 548 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC015982.1-201ENST00000608113 465 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 AC241377.1-201ENST00000619797 406 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.34□□□□□ -1.55
HMGCS1Q01581 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGCS1Q01581 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
HMGCS1Q01581 NLRP3P1-201ENST00000622303 1785 ntBASIC5.34□□□□□ -1.56
HMGCS1Q01581 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HMGCS1Q01581 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms