Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RNA5SP131-201ENST00000365452 119 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 RNA5SP30-201ENST00000365552 115 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN18P56856 AC007068.1-201ENST00000396690 844 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN18P56856 AL121977.1-201ENST00000401636 979 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 AL513325.1-201ENST00000417716 1034 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN18P56856 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN18P56856 CRIP1P1-201ENST00000427567 185 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 USP24P1-201ENST00000433802 779 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 SEPT7P3-201ENST00000455017 621 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 RPS23P2-201ENST00000463671 415 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 AC090602.1-201ENST00000469695 252 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN18P56856 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN18P56856 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN18P56856 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN18P56856 HSPE1P2-201ENST00000554777 306 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 AL049872.1-201ENST00000556323 322 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.12□□□□□ -1.59
CLDN18P56856 AC002069.2-201ENST00000603580 883 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 MIR6768-201ENST00000610734 72 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 AC090607.5-201ENST00000615692 224 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 CDC27P2-201ENST00000425026 1922 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN18P56856 AL929601.4-201ENST00000613011 1341 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CLDN18P56856 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN18P56856 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CLDN18P56856 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN18P56856 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN18P56856 AC092070.2-203ENST00000598377 3644 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN18P56856 AP000473.2-201ENST00000602659 1537 ntBASIC5.12□□□□□ -1.59
CLDN18P56856 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.12□□□□□ -1.59
CLDN18P56856 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN18P56856 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CLDN18P56856 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CLDN18P56856 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN18P56856 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN18P56856 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CLDN18P56856 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN18P56856 GNG5P2-201ENST00000372054 207 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 OR6E1P-201ENST00000414424 923 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 AC079355.1-201ENST00000421770 223 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN18P56856 VN1R21P-201ENST00000426703 765 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 FMO7P-201ENST00000436045 768 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN18P56856 BX679664.2-201ENST00000439282 283 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN18P56856 RSU1P1-201ENST00000453416 441 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 DUTP1-201ENST00000493631 470 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 AL136038.1-201ENST00000497246 351 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 RN7SL466P-201ENST00000497546 295 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN18P56856 RFPL4AP3-201ENST00000515267 345 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN18P56856 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN18P56856 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.11□□□□□ -1.59
CLDN18P56856 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN18P56856 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN18P56856 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN18P56856 AL589674.2-201ENST00000604304 337 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 AC008115.3-201ENST00000614874 549 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 AL691477.1-201ENST00000624398 162 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 AC007683.2-201ENST00000624681 714 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 AC020656.2-201ENST00000613291 5309 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 AC114786.1-201ENST00000512892 1415 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 MTCO1P46-201ENST00000451639 1491 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN18P56856 AL034546.1-201ENST00000623740 3693 ntBASIC5.11□□□□□ -1.59
CLDN18P56856 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN18P56856 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN18P56856 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN18P56856 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN18P56856 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN18P56856 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN18P56856 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN18P56856 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLDN18P56856 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN18P56856 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLDN18P56856 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN18P56856 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN18P56856 MIR143-201ENST00000385300 106 ntBASIC5.1□□□□□ -1.59
CLDN18P56856 RNA5SP91-201ENST00000390902 119 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms