Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MIR2117-201ENST00000516780 80 ntBASIC5.48□□□□□ -1.53
CLDN6P56747 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN6P56747 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN6P56747 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN6P56747 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN6P56747 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN6P56747 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.48□□□□□ -1.53
CLDN6P56747 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN6P56747 AL139407.1-201ENST00000613826 1175 ntBASIC5.48□□□□□ -1.53
CLDN6P56747 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN6P56747 AC021422.1-201ENST00000621212 473 ntBASIC5.48□□□□□ -1.53
CLDN6P56747 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.53
CLDN6P56747 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN6P56747 OR52B5P-202ENST00000641118 1110 ntBASIC5.48□□□□□ -1.53
CLDN6P56747 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN6P56747 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN6P56747 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN6P56747 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CLDN6P56747 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN6P56747 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CLDN6P56747 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN6P56747 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.48□□□□□ -1.53
CLDN6P56747 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN6P56747 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN6P56747 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN6P56747 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN6P56747 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
CLDN6P56747 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLDN6P56747 AC120036.2-201ENST00000509729 1474 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN6P56747 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN6P56747 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN6P56747 U3.2-201ENST00000362981 210 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 MIR765-201ENST00000390226 114 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 RN7SKP166-201ENST00000410812 305 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 RN7SKP279-201ENST00000411383 298 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 RPS6P23-201ENST00000413224 722 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 METTL15P3-201ENST00000415522 1221 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 SLC35E1P1-201ENST00000419313 864 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN6P56747 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN6P56747 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN6P56747 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 RPL7L1P3-201ENST00000455249 689 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN6P56747 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN6P56747 RPL7P45-201ENST00000455851 743 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN6P56747 RPS3AP15-201ENST00000483874 781 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN6P56747 RN7SKP288-201ENST00000516227 268 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 NRBF2P4-201ENST00000520874 850 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN6P56747 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN6P56747 OOSP1P2-201ENST00000579644 351 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN6P56747 MIR132-201ENST00000591554 101 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 AC027334.1-201ENST00000603257 310 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 AC087763.1-201ENST00000603391 286 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN6P56747 AL121612.2-201ENST00000612261 482 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 AC068870.2-201ENST00000620635 389 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN6P56747 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN6P56747 AC005725.1-201ENST00000577346 2607 ntBASIC5.47□□□□□ -1.53
CLDN6P56747 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CLDN6P56747 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN6P56747 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLDN6P56747 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN6P56747 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN6P56747 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLDN6P56747 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CLDN6P56747 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLDN6P56747 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.46□□□□□ -1.53
CLDN6P56747 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
CLDN6P56747 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.53
CLDN6P56747 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLDN6P56747 AL591135.1-201ENST00000401578 5914 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.46□□□□□ -1.54
CLDN6P56747 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN6P56747 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.46□□□□□ -1.54
CLDN6P56747 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLDN6P56747 AL645733.1-201ENST00000402250 217 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 AL390774.1-201ENST00000411924 246 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.46□□□□□ -1.54
CLDN6P56747 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.46□□□□□ -1.54
CLDN6P56747 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.46□□□□□ -1.54
CLDN6P56747 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.46□□□□□ -1.54
CLDN6P56747 PA2G4P6-201ENST00000438325 1197 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 ELOCP3-201ENST00000439303 348 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 AC108161.1-201ENST00000461060 402 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 RPEP1-201ENST00000504507 658 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.46□□□□□ -1.54
CLDN6P56747 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.46□□□□□ -1.54
CLDN6P56747 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.46□□□□□ -1.54
CLDN6P56747 CDH12P4-201ENST00000517835 295 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 CDH12P3-201ENST00000517935 295 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 CDH12P1-201ENST00000518435 295 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 AC126177.5-201ENST00000549599 178 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms