Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC4P56524 RNA5SP477-201ENST00000362639 119 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 RNU6-1331P-201ENST00000363658 106 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 RN7SKP128-201ENST00000364270 303 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HDAC4P56524 VN1R31P-201ENST00000417498 730 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC4P56524 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC4P56524 BX284632.2-201ENST00000421091 399 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 MTND2P11-201ENST00000423638 648 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC4P56524 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC4P56524 AL512605.1-202ENST00000441919 381 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 AL359955.2-201ENST00000445380 353 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC4P56524 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC4P56524 OSTCP1-201ENST00000455507 450 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC4P56524 AC025458.1-201ENST00000506046 166 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 AC011411.1-201ENST00000509592 876 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 RFPL4AP3-201ENST00000515267 345 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 snoU109.5-201ENST00000516231 132 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.13□□□□□ -1.43
HDAC4P56524 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC4P56524 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC4P56524 AC027369.2-201ENST00000528030 440 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC4P56524 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC4P56524 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC4P56524 AC091078.2-201ENST00000557145 559 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC4P56524 NPM1P45-201ENST00000583151 559 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 AC006115.2-201ENST00000596823 202 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC4P56524 QTRT1P1-201ENST00000604344 1078 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 AC145423.1-201ENST00000605712 336 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 AL109620.1-201ENST00000618738 1197 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.13□□□□□ -1.43
HDAC4P56524 AP000720.1-201ENST00000625091 483 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC4P56524 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC4P56524 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.13□□□□□ -1.43
HDAC4P56524 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC4P56524 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
HDAC4P56524 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.13□□□□□ -1.43
HDAC4P56524 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC4P56524 PARP4P2-201ENST00000446672 3326 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
HDAC4P56524 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.13□□□□□ -1.43
HDAC4P56524 AC027088.4-201ENST00000611559 1947 ntBASIC6.13□□□□□ -1.43
HDAC4P56524 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
HDAC4P56524 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC4P56524 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDAC4P56524 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
HDAC4P56524 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC4P56524 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
HDAC4P56524 TMSB4XP2-201ENST00000335179 210 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC4P56524 RN7SKP275-201ENST00000364626 301 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC4P56524 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
HDAC4P56524 MT-RNR1-201ENST00000389680 954 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 AC004386.1-201ENST00000393214 761 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.12□□□□□ -1.43
HDAC4P56524 GNG5P5-201ENST00000420444 220 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC4P56524 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.12□□□□□ -1.43
HDAC4P56524 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HDAC4P56524 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HDAC4P56524 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.12□□□□□ -1.43
HDAC4P56524 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.12□□□□□ -1.43
HDAC4P56524 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.12□□□□□ -1.43
HDAC4P56524 AC004129.2-201ENST00000457229 287 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.12□□□□□ -1.43
HDAC4P56524 AC025181.1-201ENST00000477507 416 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 ATG10-AS1-201ENST00000504846 648 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.12□□□□□ -1.43
HDAC4P56524 OR5H7P-201ENST00000514084 930 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 Y_RNA.667-201ENST00000516212 107 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 RNA5SP438-201ENST00000516561 112 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.12□□□□□ -1.43
HDAC4P56524 AC078899.1-201ENST00000521432 1185 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 TRIM51DP-201ENST00000529746 596 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.12□□□□□ -1.43
HDAC4P56524 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.12□□□□□ -1.43
HDAC4P56524 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.12□□□□□ -1.43
HDAC4P56524 AC005726.4-201ENST00000582858 458 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.12□□□□□ -1.43
HDAC4P56524 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.12□□□□□ -1.43
HDAC4P56524 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.12□□□□□ -1.43
HDAC4P56524 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.12□□□□□ -1.43
HDAC4P56524 AC027243.2-201ENST00000602530 724 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.12□□□□□ -1.43
HDAC4P56524 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.12□□□□□ -1.43
HDAC4P56524 AP005131.7-201ENST00000610087 611 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 AC092111.2-201ENST00000611627 1414 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 CASC19-260ENST00000641828 2001 ntBASIC6.12□□□□□ -1.43
HDAC4P56524 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms