Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.36□□□□□ -1.55
SOX2P48431 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 GAPDHP23-201ENST00000444823 993 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AC099063.2-201ENST00000446360 662 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 SNORD11.1-201ENST00000459482 85 ntBASIC5.36□□□□□ -1.55
SOX2P48431 RN7SL643P-201ENST00000471845 291 ntBASIC5.36□□□□□ -1.55
SOX2P48431 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 RN7SL413P-201ENST00000482700 297 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AL079303.1-201ENST00000486611 463 ntBASIC5.36□□□□□ -1.55
SOX2P48431 RN7SL350P-201ENST00000492591 299 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AC090058.1-201ENST00000498788 435 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AC009567.2-201ENST00000502989 349 ntBASIC5.36□□□□□ -1.55
SOX2P48431 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.36□□□□□ -1.55
SOX2P48431 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 NPM1P21-201ENST00000513394 762 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 SNORA81.2-201ENST00000516868 170 ntBASIC5.36□□□□□ -1.55
SOX2P48431 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 AC091163.3-201ENST00000518269 1144 ntBASIC5.36□□□□□ -1.55
SOX2P48431 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.36□□□□□ -1.55
SOX2P48431 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.36□□□□□ -1.55
SOX2P48431 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.36□□□□□ -1.55
SOX2P48431 MTCYBP23-201ENST00000558717 1102 ntBASIC5.36□□□□□ -1.55
SOX2P48431 NPM1P42-201ENST00000560329 862 ntBASIC5.36□□□□□ -1.55
SOX2P48431 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 AC106734.1-201ENST00000568646 663 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AC006120.1-201ENST00000579375 546 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 AC084373.1-201ENST00000603311 235 ntBASIC5.36□□□□□ -1.55
SOX2P48431 ELOCP35-201ENST00000604289 336 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.36□□□□□ -1.55
SOX2P48431 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 AC097478.2-201ENST00000610572 514 ntBASIC5.36□□□□□ -1.55
SOX2P48431 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX2P48431 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 FANCD2P2-201ENST00000437591 1400 ntBASIC5.36□□□□□ -1.55
SOX2P48431 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.36□□□□□ -1.55
SOX2P48431 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX2P48431 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SOX2P48431 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SOX2P48431 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SOX2P48431 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 AC087516.1-201ENST00000561236 2428 ntBASIC5.35□□□□□ -1.55
SOX2P48431 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SOX2P48431 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SOX2P48431 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SOX2P48431 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SOX2P48431 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SOX2P48431 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX2P48431 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SOX2P48431 AP002530.1-201ENST00000405705 684 ntBASIC5.35□□□□□ -1.55
SOX2P48431 RNA5SP155-201ENST00000411154 129 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.35□□□□□ -1.55
SOX2P48431 AL592310.1-201ENST00000414330 671 ntBASIC5.35□□□□□ -1.55
SOX2P48431 RPS26P13-201ENST00000419030 330 ntBASIC5.35□□□□□ -1.55
SOX2P48431 MTCYBP7-201ENST00000419540 1134 ntBASIC5.35□□□□□ -1.55
SOX2P48431 MTND2P16-201ENST00000419987 799 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 XKRYP1-201ENST00000423438 492 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX2P48431 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SOX2P48431 AL138479.1-201ENST00000426913 484 ntBASIC5.35□□□□□ -1.55
SOX2P48431 XKRYP2-201ENST00000432915 492 ntBASIC5.35□□□□□ -1.55
SOX2P48431 USP24P1-201ENST00000433802 779 ntBASIC5.35□□□□□ -1.55
SOX2P48431 PSMD8P1-201ENST00000436275 769 ntBASIC5.35□□□□□ -1.55
SOX2P48431 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 AC009244.1-201ENST00000450566 258 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AL162739.1-201ENST00000450606 307 ntBASIC5.35□□□□□ -1.55
SOX2P48431 LRRC37A14P-201ENST00000452297 462 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 AC096992.1-201ENST00000459808 709 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AC128716.1-201ENST00000475129 166 ntBASIC5.35□□□□□ -1.55
SOX2P48431 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
SOX2P48431 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms