Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.84□□□□□ -1.63
NKX2-1P43699 OR56A7P-201ENST00000524865 941 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC084851.2-201ENST00000530377 364 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC008055.1-201ENST00000547032 609 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NKX2-1P43699 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC233266.2-201ENST00000567067 528 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC005242.1-201ENST00000585658 438 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC084373.1-201ENST00000603311 235 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC105148.1-201ENST00000604961 409 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 AC007786.3-201ENST00000615154 596 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
NKX2-1P43699 AC073869.7-201ENST00000640874 297 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NKX2-1P43699 OR5AC4P-202ENST00000642086 985 ntBASIC4.84□□□□□ -1.63
NKX2-1P43699 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.84□□□□□ -1.63
NKX2-1P43699 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NKX2-1P43699 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
NKX2-1P43699 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NKX2-1P43699 AL034546.1-201ENST00000623740 3693 ntBASIC4.84□□□□□ -1.64
NKX2-1P43699 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NKX2-1P43699 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
NKX2-1P43699 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NKX2-1P43699 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NKX2-1P43699 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
NKX2-1P43699 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC009962.1-201ENST00000567327 3813 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NKX2-1P43699 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
NKX2-1P43699 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 RNA5SP308-201ENST00000362532 115 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 RNA5SP346-201ENST00000363541 121 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NKX2-1P43699 RNU6-1176P-201ENST00000390955 107 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 RPL21P50-201ENST00000417698 477 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 RPS7P8-201ENST00000418311 581 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 AC073508.1-201ENST00000428866 656 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 AL645939.3-201ENST00000435408 225 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 NPM1P23-201ENST00000440193 849 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 AL513321.1-201ENST00000441175 761 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX2-1P43699 POU5F1P5-201ENST00000445059 658 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC092691.2-201ENST00000461787 803 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 AC122714.1-201ENST00000502510 459 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX2-1P43699 HAUS1P1-201ENST00000505275 832 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
NKX2-1P43699 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX2-1P43699 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.83□□□□□ -1.64
NKX2-1P43699 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC027216.1-201ENST00000577726 685 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC4.83□□□□□ -1.64
NKX2-1P43699 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC036176.3-201ENST00000602456 418 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 AC004775.1-201ENST00000607389 753 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 U91328.4-201ENST00000608919 517 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 AC004241.3-201ENST00000611728 517 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC011933.2-201ENST00000578539 2790 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
NKX2-1P43699 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 PARP4P2-201ENST00000446672 3326 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms