Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 MTND4LP14-201ENST00000429447 288 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.04□□□□□ -1.44
PTPN9P43378 AC126120.1-201ENST00000431082 470 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 RPL17P35-201ENST00000432217 549 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.04□□□□□ -1.44
PTPN9P43378 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.04□□□□□ -1.44
PTPN9P43378 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.04□□□□□ -1.44
PTPN9P43378 OR7E116P-201ENST00000448529 957 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 AL353718.1-201ENST00000451028 517 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 RPL12P39-201ENST00000455456 496 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 AC135999.1-201ENST00000478962 479 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.04□□□□□ -1.44
PTPN9P43378 AC074255.1-201ENST00000511259 501 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.04□□□□□ -1.44
PTPN9P43378 GTF2IP11-201ENST00000526931 420 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PTPN9P43378 AC092451.2-201ENST00000538746 658 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.04□□□□□ -1.44
PTPN9P43378 MTND2P17-201ENST00000550281 688 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.04□□□□□ -1.44
PTPN9P43378 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN9P43378 MIR4260-201ENST00000583107 67 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 AC040174.2-201ENST00000602701 465 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 AC067773.1-201ENST00000603284 1094 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN9P43378 AC144521.1-201ENST00000607148 956 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN9P43378 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN9P43378 UGT2B24P-201ENST00000514441 1597 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN9P43378 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN9P43378 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN9P43378 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.04□□□□□ -1.44
PTPN9P43378 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.04□□□□□ -1.44
PTPN9P43378 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PTPN9P43378 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN9P43378 AC087565.3-202ENST00000642085 1603 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN9P43378 Z95114.1-201ENST00000624264 14574 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.03□□□□□ -1.44
PTPN9P43378 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN9P43378 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN9P43378 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PTPN9P43378 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PTPN9P43378 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN9P43378 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PTPN9P43378 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PTPN9P43378 AL353625.1-202ENST00000366273 571 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN9P43378 OR7E101P-201ENST00000400428 513 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 UBE2V1P15-201ENST00000407776 448 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 METTL15P3-201ENST00000415522 1221 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 AK4P4-201ENST00000419465 646 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 BX323845.3-201ENST00000428215 527 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN9P43378 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN9P43378 MRPS33P4-201ENST00000434892 317 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 GAPDHP48-201ENST00000436626 961 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN9P43378 AC074367.1-201ENST00000438685 1125 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 DNAJA1P5-201ENST00000440278 943 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 OR52E7P-201ENST00000452394 933 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN9P43378 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN9P43378 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN9P43378 AC026782.2-201ENST00000510845 636 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN9P43378 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN9P43378 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN9P43378 AC139365.2-201ENST00000517972 253 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN9P43378 IGLV3-30-201ENST00000524362 298 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.03□□□□□ -1.44
PTPN9P43378 AC005000.1-201ENST00000536192 288 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.03□□□□□ -1.44
PTPN9P43378 AC096996.1-201ENST00000563813 325 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN9P43378 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.03□□□□□ -1.44
PTPN9P43378 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.03□□□□□ -1.44
PTPN9P43378 LSM1P2-201ENST00000604911 322 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 FAM27E4-201ENST00000605259 342 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 HIRAP1-201ENST00000605318 787 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 AC016542.1-201ENST00000608259 493 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN9P43378 AC021766.1-201ENST00000624404 741 ntBASIC6.03□□□□□ -1.44
PTPN9P43378 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN9P43378 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.03□□□□□ -1.44
PTPN9P43378 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN9P43378 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PTPN9P43378 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PTPN9P43378 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.03□□□□□ -1.44
PTPN9P43378 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN9P43378 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN9P43378 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTPN9P43378 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PTPN9P43378 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTPN9P43378 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTPN9P43378 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
PTPN9P43378 AL034546.1-201ENST00000623740 3693 ntBASIC6.02□□□□□ -1.45
PTPN9P43378 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms