Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.32□□□□□ -1.56
APOBEC1P41238 NPM1P42-201ENST00000560329 862 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.32□□□□□ -1.56
APOBEC1P41238 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.32□□□□□ -1.56
APOBEC1P41238 LINC00556-201ENST00000569603 412 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.32□□□□□ -1.56
APOBEC1P41238 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.32□□□□□ -1.56
APOBEC1P41238 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.32□□□□□ -1.56
APOBEC1P41238 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
APOBEC1P41238 AL450270.1-201ENST00000606160 391 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AL592494.3-201ENST00000609485 464 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AC025262.3-201ENST00000623666 360 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.32□□□□□ -1.56
APOBEC1P41238 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.32□□□□□ -1.56
APOBEC1P41238 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.32□□□□□ -1.56
APOBEC1P41238 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.32□□□□□ -1.56
APOBEC1P41238 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 AC239868.2-201ENST00000564237 4527 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.32□□□□□ -1.56
APOBEC1P41238 AC015799.1-201ENST00000622996 3122 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
APOBEC1P41238 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 AL356317.1-201ENST00000396110 1436 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
APOBEC1P41238 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.31□□□□□ -1.56
APOBEC1P41238 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
APOBEC1P41238 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
APOBEC1P41238 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
APOBEC1P41238 SAMMSON-210ENST00000641260 1308 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
APOBEC1P41238 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
APOBEC1P41238 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
APOBEC1P41238 RNU6-1251P-201ENST00000364502 107 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 RPL11P3-201ENST00000395256 523 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.31□□□□□ -1.56
APOBEC1P41238 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.31□□□□□ -1.56
APOBEC1P41238 GLUD1P9-201ENST00000420997 1173 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 AC019205.1-201ENST00000421830 730 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
APOBEC1P41238 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.31□□□□□ -1.56
APOBEC1P41238 USP24P1-201ENST00000433802 779 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 AC110602.1-201ENST00000437414 318 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.31□□□□□ -1.56
APOBEC1P41238 RPS12P17-201ENST00000438591 377 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.31□□□□□ -1.56
APOBEC1P41238 EIF5AP4-201ENST00000441206 465 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.31□□□□□ -1.56
APOBEC1P41238 AC007000.2-201ENST00000442564 487 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
APOBEC1P41238 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.31□□□□□ -1.56
APOBEC1P41238 PPP1R11P1-201ENST00000486095 376 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.31□□□□□ -1.56
APOBEC1P41238 RPL37P23-201ENST00000492641 294 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.31□□□□□ -1.56
APOBEC1P41238 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.31□□□□□ -1.56
APOBEC1P41238 AC016550.3-201ENST00000515706 767 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 AC067904.2-201ENST00000517322 1283 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.31□□□□□ -1.56
APOBEC1P41238 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.31□□□□□ -1.56
APOBEC1P41238 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.31□□□□□ -1.56
APOBEC1P41238 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
APOBEC1P41238 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.31□□□□□ -1.56
APOBEC1P41238 AC091078.2-201ENST00000557145 559 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.31□□□□□ -1.56
APOBEC1P41238 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.31□□□□□ -1.56
APOBEC1P41238 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.31□□□□□ -1.56
APOBEC1P41238 KATNBL1P5-201ENST00000605015 517 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 AL031658.2-201ENST00000616850 651 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.31□□□□□ -1.56
APOBEC1P41238 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.31□□□□□ -1.56
APOBEC1P41238 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
APOBEC1P41238 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
APOBEC1P41238 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.31□□□□□ -1.56
APOBEC1P41238 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
APOBEC1P41238 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
APOBEC1P41238 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
APOBEC1P41238 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
APOBEC1P41238 MSL3P1-202ENST00000440028 1468 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
APOBEC1P41238 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
APOBEC1P41238 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.31□□□□□ -1.56
APOBEC1P41238 AC092111.2-201ENST00000611627 1414 ntBASIC5.31□□□□□ -1.56
APOBEC1P41238 AL034546.1-201ENST00000623740 3693 ntBASIC5.3□□□□□ -1.56
APOBEC1P41238 PDZK1P1-202ENST00000425209 1350 ntBASIC5.3□□□□□ -1.56
APOBEC1P41238 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.3□□□□□ -1.56
APOBEC1P41238 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.3□□□□□ -1.56
APOBEC1P41238 AC117409.1-201ENST00000470499 1310 ntBASIC5.3□□□□□ -1.56
APOBEC1P41238 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
APOBEC1P41238 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
APOBEC1P41238 AL592494.2-201ENST00000425455 1548 ntBASIC5.3□□□□□ -1.56
APOBEC1P41238 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
APOBEC1P41238 SUGT1P2-201ENST00000379452 992 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms