Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AL590399.4-201ENST00000436561 601 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.98□□□□□ -1.45
CHRNA3P32297 AL445665.1-202ENST00000452436 324 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 CR383656.1-201ENST00000484916 377 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 PPIAP19-201ENST00000486414 492 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 GAPDHP71-201ENST00000511530 1003 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.98□□□□□ -1.45
CHRNA3P32297 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHRNA3P32297 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.98□□□□□ -1.45
CHRNA3P32297 AC091078.2-201ENST00000557145 559 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 AC010547.7-201ENST00000570323 333 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.98□□□□□ -1.45
CHRNA3P32297 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHRNA3P32297 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHRNA3P32297 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CHRNA3P32297 AL137246.1-201ENST00000607072 977 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHRNA3P32297 AP005431.1-201ENST00000618479 319 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 AC127024.6-201ENST00000621598 424 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
CHRNA3P32297 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.98□□□□□ -1.45
CHRNA3P32297 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.98□□□□□ -1.45
CHRNA3P32297 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CHRNA3P32297 KARSP1-201ENST00000451871 1752 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.98□□□□□ -1.45
CHRNA3P32297 AL929601.4-201ENST00000613011 1341 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 HSPD1P7-201ENST00000447985 1686 ntBASIC5.98□□□□□ -1.45
CHRNA3P32297 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CHRNA3P32297 AC015689.2-201ENST00000528172 1738 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHRNA3P32297 DDX18P6-201ENST00000450119 1997 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHRNA3P32297 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.97□□□□□ -1.45
CHRNA3P32297 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.97□□□□□ -1.45
CHRNA3P32297 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.97□□□□□ -1.45
CHRNA3P32297 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CHRNA3P32297 SNORA5.1-201ENST00000384275 131 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 AC092642.1-201ENST00000392417 425 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.97□□□□□ -1.45
CHRNA3P32297 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.97□□□□□ -1.45
CHRNA3P32297 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.97□□□□□ -1.45
CHRNA3P32297 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.97□□□□□ -1.45
CHRNA3P32297 LINC02210-201ENST00000444561 288 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.97□□□□□ -1.45
CHRNA3P32297 AC083899.1-201ENST00000454465 3819 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 AC104849.1-201ENST00000462623 405 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.97□□□□□ -1.45
CHRNA3P32297 AC099521.1-201ENST00000482557 334 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.97□□□□□ -1.45
CHRNA3P32297 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHRNA3P32297 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.97□□□□□ -1.45
CHRNA3P32297 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.97□□□□□ -1.45
CHRNA3P32297 OR4A17P-201ENST00000526032 904 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.97□□□□□ -1.45
CHRNA3P32297 AC139697.1-201ENST00000548429 745 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.97□□□□□ -1.45
CHRNA3P32297 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.97□□□□□ -1.45
CHRNA3P32297 RPL12P48-201ENST00000605620 304 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 RNU6-84P-201ENST00000607737 102 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 AC022960.2-201ENST00000616300 666 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 AC103703.1-201ENST00000634783 663 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.97□□□□□ -1.45
CHRNA3P32297 OR11H2-202ENST00000641517 1085 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.97□□□□□ -1.45
CHRNA3P32297 AC093909.5-201ENST00000621839 1799 ntBASIC5.97□□□□□ -1.45
CHRNA3P32297 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.97□□□□□ -1.45
CHRNA3P32297 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHRNA3P32297 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHRNA3P32297 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.96□□□□□ -1.45
CHRNA3P32297 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CHRNA3P32297 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.96□□□□□ -1.45
CHRNA3P32297 AC123912.3-201ENST00000600907 1367 ntBASIC5.96□□□□□ -1.45
CHRNA3P32297 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHRNA3P32297 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHRNA3P32297 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHRNA3P32297 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHRNA3P32297 TMSB4XP4-201ENST00000323496 618 ntBASIC5.96□□□□□ -1.46
CHRNA3P32297 RNA5SP500-201ENST00000364486 119 ntBASIC5.96□□□□□ -1.46
CHRNA3P32297 RN7SKP292-201ENST00000365522 317 ntBASIC5.96□□□□□ -1.46
CHRNA3P32297 SNORA70.6-201ENST00000383934 134 ntBASIC5.96□□□□□ -1.46
CHRNA3P32297 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CHRNA3P32297 OR7E101P-201ENST00000400428 513 ntBASIC5.96□□□□□ -1.46
CHRNA3P32297 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.96□□□□□ -1.46
CHRNA3P32297 RNF10P1-201ENST00000418589 369 ntBASIC5.96□□□□□ -1.46
CHRNA3P32297 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.96□□□□□ -1.46
CHRNA3P32297 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.96□□□□□ -1.46
CHRNA3P32297 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.96□□□□□ -1.46
CHRNA3P32297 NXT1P1-201ENST00000458481 316 ntBASIC5.96□□□□□ -1.46
CHRNA3P32297 AC090602.1-201ENST00000469695 252 ntBASIC5.96□□□□□ -1.46
CHRNA3P32297 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHRNA3P32297 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.96□□□□□ -1.46
CHRNA3P32297 RPSAP51-201ENST00000497462 645 ntBASIC5.96□□□□□ -1.46
CHRNA3P32297 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CHRNA3P32297 KCTD9P6-201ENST00000522306 950 ntBASIC5.96□□□□□ -1.46
CHRNA3P32297 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.96□□□□□ -1.46
CHRNA3P32297 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.96□□□□□ -1.46
CHRNA3P32297 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.96□□□□□ -1.46
CHRNA3P32297 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.96□□□□□ -1.46
CHRNA3P32297 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.96□□□□□ -1.46
CHRNA3P32297 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms