Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC8P31273 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC8P31273 AC130364.2-201ENST00000528639 604 ntBASIC6.2□□□□□ -1.42
HOXC8P31273 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC8P31273 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC8P31273 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC8P31273 AGGF1P7-201ENST00000562369 913 ntBASIC6.2□□□□□ -1.42
HOXC8P31273 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC8P31273 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC8P31273 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC8P31273 AC092944.2-201ENST00000605443 889 ntBASIC6.2□□□□□ -1.42
HOXC8P31273 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC8P31273 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HOXC8P31273 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HOXC8P31273 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC8P31273 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC8P31273 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HOXC8P31273 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC8P31273 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HOXC8P31273 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HOXC8P31273 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 THAP12P8-201ENST00000447914 2115 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HOXC8P31273 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HOXC8P31273 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
HOXC8P31273 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HOXC8P31273 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC8P31273 SNORD1C-201ENST00000363315 78 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HOXC8P31273 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HOXC8P31273 MIR223-201ENST00000385204 110 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 RNA5SP91-201ENST00000390902 119 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 RNA5SP339-201ENST00000390987 122 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 RN7SKP279-201ENST00000411383 298 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.19□□□□□ -1.42
HOXC8P31273 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC8P31273 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC8P31273 BX119904.3-201ENST00000428194 957 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 MRPS21P3-201ENST00000436696 262 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC8P31273 AC245047.2-201ENST00000441060 530 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXC8P31273 RN7SL329P-201ENST00000467740 299 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 RPL7P39-201ENST00000481157 744 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 RPS4XP1-201ENST00000482189 787 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 OR5M14P-201ENST00000506803 618 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC8P31273 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC8P31273 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
HOXC8P31273 MTND2P7-201ENST00000521337 640 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 AC139697.1-201ENST00000548429 745 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 HAUS8P1-201ENST00000549005 542 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 BLZF2P-201ENST00000553776 1130 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC8P31273 AC008536.1-201ENST00000602872 669 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 WBP1LP8-201ENST00000617401 327 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 AF117829.2-201ENST00000619538 361 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 SAMMSON-209ENST00000641222 1100 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.19□□□□□ -1.42
HOXC8P31273 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HOXC8P31273 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC8P31273 AC053481.2-202ENST00000582394 1500 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 AC016251.2-201ENST00000623393 3089 ntBASIC6.19□□□□□ -1.42
HOXC8P31273 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HOXC8P31273 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC8P31273 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXC8P31273 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXC8P31273 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 PWAR1-201ENST00000624188 2414 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXC8P31273 BX284613.1-201ENST00000452221 1641 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
HOXC8P31273 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXC8P31273 AC005042.1-201ENST00000393397 800 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 AL645927.1-201ENST00000396783 406 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 RNA5SP251-201ENST00000410614 137 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 METTL15P3-201ENST00000415522 1221 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXC8P31273 PRUNEP1-201ENST00000425846 705 ntBASIC6.18□□□□□ -1.42
HOXC8P31273 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms