Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD40LGP29965 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CD40LGP29965 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.02□□□□□ -1.61
CD40LGP29965 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD40LGP29965 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD40LGP29965 SNORA64.3-201ENST00000365647 134 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 GAPDHP15-201ENST00000398586 975 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.02□□□□□ -1.61
CD40LGP29965 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.02□□□□□ -1.61
CD40LGP29965 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.02□□□□□ -1.61
CD40LGP29965 AC092601.1-201ENST00000444526 383 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 AC097359.1-201ENST00000447946 463 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 RN7SL39P-201ENST00000462264 297 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.02□□□□□ -1.61
CD40LGP29965 RN7SL188P-201ENST00000469842 285 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 KHDC1P1-201ENST00000511053 508 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 EIF3KP3-201ENST00000514461 639 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.02□□□□□ -1.61
CD40LGP29965 AC027369.5-201ENST00000533838 755 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 AC122688.1-201ENST00000541494 223 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.02□□□□□ -1.61
CD40LGP29965 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.02□□□□□ -1.61
CD40LGP29965 AC006349.1-201ENST00000555526 235 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 AL390334.1-201ENST00000556395 450 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD40LGP29965 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.02□□□□□ -1.61
CD40LGP29965 RN7SL435P-201ENST00000584418 282 ntBASIC5.02□□□□□ -1.61
CD40LGP29965 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.02□□□□□ -1.61
CD40LGP29965 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.02□□□□□ -1.61
CD40LGP29965 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD40LGP29965 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CD40LGP29965 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.02□□□□□ -1.61
CD40LGP29965 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.02□□□□□ -1.61
CD40LGP29965 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD40LGP29965 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.02□□□□□ -1.61
CD40LGP29965 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.02□□□□□ -1.61
CD40LGP29965 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.02□□□□□ -1.61
CD40LGP29965 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD40LGP29965 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CD40LGP29965 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CD40LGP29965 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
CD40LGP29965 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 RNA5SP326-201ENST00000363209 110 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 AC233289.1-201ENST00000403700 508 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 RPL12P23-201ENST00000405880 490 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 MIR1271-201ENST00000408537 86 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 RN7SKP146-201ENST00000410242 334 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 RN7SKP144-201ENST00000411108 279 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 RPS12P17-201ENST00000438591 377 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 SOCS5P1-201ENST00000440415 949 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CD40LGP29965 AC015983.1-201ENST00000441577 373 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 AC090804.1-201ENST00000448870 490 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.01□□□□□ -1.61
CD40LGP29965 RN7SL273P-201ENST00000481561 299 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 AC117500.1-201ENST00000497352 755 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 AC018645.1-201ENST00000505003 109 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 AC108103.1-201ENST00000511286 446 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.01□□□□□ -1.61
CD40LGP29965 RPS27AP18-201ENST00000515536 459 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 RNA5SP418-201ENST00000515951 117 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.01□□□□□ -1.61
CD40LGP29965 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.01□□□□□ -1.61
CD40LGP29965 KCTD9P6-201ENST00000522306 950 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CD40LGP29965 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.01□□□□□ -1.61
CD40LGP29965 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.01□□□□□ -1.61
CD40LGP29965 AC026898.1-201ENST00000586404 571 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 AL008582.1-201ENST00000609612 442 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 AL139407.1-201ENST00000613826 1175 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.01□□□□□ -1.61
CD40LGP29965 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.01□□□□□ -1.61
CD40LGP29965 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.01□□□□□ -1.61
CD40LGP29965 OR55B1P-203ENST00000641518 2602 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CD40LGP29965 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.01□□□□□ -1.61
CD40LGP29965 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 AC112198.2-201ENST00000426589 6996 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 AC100778.3-201ENST00000580060 1750 ntBASIC5.01□□□□□ -1.61
CD40LGP29965 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40LGP29965 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.01□□□□□ -1.61
CD40LGP29965 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD40LGP29965 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CD40LGP29965 SSXP3-201ENST00000442971 1300 ntBASIC5□□□□□ -1.61
CD40LGP29965 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD40LGP29965 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
CD40LGP29965 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms