Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 RNA5SP79-201ENST00000365193 109 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 U3.14-201ENST00000365363 227 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL8A1P27658 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
COL8A1P27658 Y_RNA.476-201ENST00000384347 108 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL8A1P27658 ARSFP1-201ENST00000398758 477 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 AL353151.1-201ENST00000402406 604 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.79□□□□□ -1.32
COL8A1P27658 AL592293.2-201ENST00000422292 996 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 RPL12P11-201ENST00000439970 501 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.79□□□□□ -1.32
COL8A1P27658 AL672138.1-201ENST00000450604 1015 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 GOT2P2-201ENST00000450663 1251 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC6.79□□□□□ -1.32
COL8A1P27658 AC019080.2-201ENST00000453859 394 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 RN7SL36P-201ENST00000469345 276 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 RPS7P6-201ENST00000485777 579 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL8A1P27658 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.79□□□□□ -1.32
COL8A1P27658 NDUFB4P2-201ENST00000509515 391 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 RPL7L1P7-201ENST00000509986 724 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 AC026412.2-201ENST00000512270 1075 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 SEPT14P4-201ENST00000513445 186 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 AC008802.1-201ENST00000519121 791 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 AC008429.2-201ENST00000523057 864 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 OR5M7P-201ENST00000526140 972 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC6.79□□□□□ -1.32
COL8A1P27658 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.79□□□□□ -1.32
COL8A1P27658 AC089998.3-201ENST00000549715 493 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COL8A1P27658 AC089984.3-201ENST00000552838 363 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 DPPA3P2-202ENST00000557188 1219 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.79□□□□□ -1.32
COL8A1P27658 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.79□□□□□ -1.32
COL8A1P27658 AC091932.1-201ENST00000569381 427 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 AC137800.2-201ENST00000574375 120 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.79□□□□□ -1.32
COL8A1P27658 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.79□□□□□ -1.32
COL8A1P27658 POLR3GP2-201ENST00000588366 668 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.79□□□□□ -1.32
COL8A1P27658 AC008638.3-201ENST00000603341 463 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.79□□□□□ -1.32
COL8A1P27658 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL8A1P27658 TPTEP1-208ENST00000636884 213 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.79□□□□□ -1.32
COL8A1P27658 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
COL8A1P27658 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
COL8A1P27658 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
COL8A1P27658 USP13-203ENST00000496897 2747 ntTSL 2 BASIC6.79□□□□□ -1.32
COL8A1P27658 VEZF1P1-201ENST00000423931 1541 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC6.79□□□□□ -1.32
COL8A1P27658 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL8A1P27658 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC6.79□□□□□ -1.32
COL8A1P27658 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
COL8A1P27658 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC6.79□□□□□ -1.32
COL8A1P27658 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL8A1P27658 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC6.79□□□□□ -1.32
COL8A1P27658 AL356289.3-201ENST00000640049 2669 ntBASIC6.79□□□□□ -1.32
COL8A1P27658 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COL8A1P27658 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL8A1P27658 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC6.79□□□□□ -1.32
COL8A1P27658 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
COL8A1P27658 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC6.79□□□□□ -1.32
COL8A1P27658 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL8A1P27658 DDX50P1-201ENST00000438163 2400 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.78□□□□□ -1.32
COL8A1P27658 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
COL8A1P27658 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 ULBP1-201ENST00000229708 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL8A1P27658 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL8A1P27658 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 TRAV35-201ENST00000390462 330 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 AC113608.1-201ENST00000398740 305 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 MIR1302-3-201ENST00000408128 138 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 RNA5SP177-201ENST00000410122 107 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 RN7SKP32-201ENST00000410167 303 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC6.78□□□□□ -1.32
COL8A1P27658 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.78□□□□□ -1.32
COL8A1P27658 SDCBPP2-201ENST00000424643 885 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 SDAD1P3-201ENST00000427380 333 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC6.78□□□□□ -1.32
COL8A1P27658 MTCYBP9-201ENST00000431021 303 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 RN7SL251P-201ENST00000464175 297 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms