Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC9.4□□□□□ -0.9
TOP2AP11388 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
TOP2AP11388 RN7SKP149-201ENST00000363008 344 ntBASIC9.4□□□□□ -0.91
TOP2AP11388 RPL11P3-201ENST00000395256 523 ntBASIC9.4□□□□□ -0.91
TOP2AP11388 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TOP2AP11388 CHMP1B2P-201ENST00000399581 597 ntBASIC9.4□□□□□ -0.91
TOP2AP11388 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
TOP2AP11388 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC9.4□□□□□ -0.91
TOP2AP11388 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC9.4□□□□□ -0.91
TOP2AP11388 NDUFA5P8-201ENST00000449019 346 ntBASIC9.4□□□□□ -0.91
TOP2AP11388 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
TOP2AP11388 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC9.4□□□□□ -0.91
TOP2AP11388 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC9.4□□□□□ -0.91
TOP2AP11388 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC9.4□□□□□ -0.91
TOP2AP11388 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC9.4□□□□□ -0.91
TOP2AP11388 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC9.4□□□□□ -0.91
TOP2AP11388 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC9.4□□□□□ -0.91
TOP2AP11388 AP005131.7-201ENST00000610087 611 ntBASIC9.4□□□□□ -0.91
TOP2AP11388 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC9.4□□□□□ -0.91
TOP2AP11388 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC9.4□□□□□ -0.91
TOP2AP11388 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TOP2AP11388 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
TOP2AP11388 AL158152.1-201ENST00000602652 1435 ntBASIC9.4□□□□□ -0.91
TOP2AP11388 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC9.4□□□□□ -0.91
TOP2AP11388 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
TOP2AP11388 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TOP2AP11388 MIPEPP2-201ENST00000422560 1819 ntBASIC9.39□□□□□ -0.91
TOP2AP11388 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC9.39□□□□□ -0.91
TOP2AP11388 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TOP2AP11388 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TOP2AP11388 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
TOP2AP11388 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TOP2AP11388 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TOP2AP11388 RPS4XP16-201ENST00000427198 791 ntBASIC9.39□□□□□ -0.91
TOP2AP11388 AC096741.1-201ENST00000472250 846 ntBASIC9.39□□□□□ -0.91
TOP2AP11388 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC9.39□□□□□ -0.91
TOP2AP11388 CLMN-206ENST00000556441 452 ntTSL 5 BASIC9.39□□□□□ -0.91
TOP2AP11388 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC9.39□□□□□ -0.91
TOP2AP11388 AC068790.7-201ENST00000602347 528 ntBASIC9.39□□□□□ -0.91
TOP2AP11388 AP003175.1-201ENST00000641383 6658 ntBASIC9.39□□□□□ -0.91
TOP2AP11388 NXF4-202ENST00000416098 1465 ntBASIC9.39□□□□□ -0.91
TOP2AP11388 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TOP2AP11388 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
TOP2AP11388 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TOP2AP11388 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TOP2AP11388 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC9.38□□□□□ -0.91
TOP2AP11388 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TOP2AP11388 AC123769.2-201ENST00000624332 5984 ntBASIC9.38□□□□□ -0.91
TOP2AP11388 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TOP2AP11388 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC9.38□□□□□ -0.91
TOP2AP11388 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC9.38□□□□□ -0.91
TOP2AP11388 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC9.38□□□□□ -0.91
TOP2AP11388 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC9.38□□□□□ -0.91
TOP2AP11388 KNOP1P3-201ENST00000446933 426 ntBASIC9.38□□□□□ -0.91
TOP2AP11388 RPL31P44-201ENST00000447680 377 ntBASIC9.38□□□□□ -0.91
TOP2AP11388 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC9.38□□□□□ -0.91
TOP2AP11388 AC021006.3-201ENST00000530771 192 ntBASIC9.38□□□□□ -0.91
TOP2AP11388 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC9.38□□□□□ -0.91
TOP2AP11388 NPM1P42-201ENST00000560329 862 ntBASIC9.38□□□□□ -0.91
TOP2AP11388 AC009597.2-201ENST00000604659 592 ntBASIC9.38□□□□□ -0.91
TOP2AP11388 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TOP2AP11388 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
TOP2AP11388 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC9.38□□□□□ -0.91
TOP2AP11388 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
TOP2AP11388 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TOP2AP11388 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TOP2AP11388 HSPA8P14-201ENST00000552265 1805 ntBASIC9.37□□□□□ -0.91
TOP2AP11388 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC9.37□□□□□ -0.91
TOP2AP11388 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TOP2AP11388 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TOP2AP11388 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TOP2AP11388 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
TOP2AP11388 AC092651.1-201ENST00000426110 312 ntBASIC9.37□□□□□ -0.91
TOP2AP11388 MGAT2P2-201ENST00000427194 797 ntBASIC9.37□□□□□ -0.91
TOP2AP11388 RPL7P56-201ENST00000429441 717 ntBASIC9.37□□□□□ -0.91
TOP2AP11388 RN7SL188P-201ENST00000469842 285 ntBASIC9.37□□□□□ -0.91
TOP2AP11388 RPL7P16-201ENST00000479738 738 ntBASIC9.37□□□□□ -0.91
TOP2AP11388 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC9.37□□□□□ -0.91
TOP2AP11388 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC9.37□□□□□ -0.91
TOP2AP11388 FTH1P8-201ENST00000498161 514 ntBASIC9.37□□□□□ -0.91
TOP2AP11388 BNIP3P1-201ENST00000547295 580 ntBASIC9.37□□□□□ -0.91
TOP2AP11388 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC9.37□□□□□ -0.91
TOP2AP11388 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC9.37□□□□□ -0.91
TOP2AP11388 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC9.37□□□□□ -0.91
TOP2AP11388 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
TOP2AP11388 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC9.37□□□□□ -0.91
TOP2AP11388 AC073575.2-201ENST00000614212 627 ntBASIC9.37□□□□□ -0.91
TOP2AP11388 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TOP2AP11388 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
TOP2AP11388 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TOP2AP11388 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
TOP2AP11388 SPATA31C1-201ENST00000420021 3895 ntBASIC9.37□□□□□ -0.91
TOP2AP11388 AC007996.1-201ENST00000620414 2821 ntBASIC9.37□□□□□ -0.91
TOP2AP11388 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
TOP2AP11388 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
TOP2AP11388 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TOP2AP11388 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TOP2AP11388 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
TOP2AP11388 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TOP2AP11388 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms